| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2399 |
|---|
| Symbol | |
|---|
| ID | 5870188 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 2684793 |
|---|
| End bp | 2685677 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641547522 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001668634 |
|---|
| Protein GI | 167033403 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.480883 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCACA TCCTGCGCAA GCGCAGCACC CGCATCGCCT TGACTGCCAC CACTGGCCTG
CTCGTGGCCA CCCTGGGCTT CTTCGCCTGG CAAAGTTTCT ACCCGGTTCA GGCCGCTTCC
GGTTGGGATG TCGAGGTGTT GCATCGCGAC GTGACCAAGG CCGCCTCGTT GCTGCCACAA
GCCGATGGCA GCTTGCTGGT CAGCCGTGAG CTGGACGACG GCCGGGGCAG CATCCTCAAG
ATCACCGCTA GCGGTGATCG CGTGGTGGTG ATCGACAACC TGTCCAAGCC TGATGGCATG
GTGGCGGCGC AGGACGGTTG GGTGTTCAGC CAGGAAGGTG GTCAGGCTCC CGTCAGCCTG
TCTCGCGATG GCCAGGTAAC CCACCTGTTC GATGGCGAGA GCGTGCAAGG CCTGTGGAAC
GACGGCGATC ATCTGTTCGC TATCGAAGAC CGCAAGGGCA ACGGCCGCCT GATGCGCTAT
GACTGGAACA GCGGCCAGCT CGATGTGCTG CGTTCCGGCC TGACCGAAAC CGAAGGCCTT
ACCCGTTGCA GTGATGGCCG CCTGCTGTAT ACCGAAAAGG CCAATGGCAA GGTCCGCGCC
CTGTCCGACG ATGGCCGCGA CCCAGTAGTG GTCGACGGCC TGCGTAACCC TACGTTCTTG
TACTGTGACC AACGTGGCCT GTGGATCAGC GAGGACAACA CGCACCGCGC GCGCTTGTTG
CTCATCGACG CTGACGGCGT CCAGCACACC ATGCTGACCT TCCTCAAGGC GCCGCAGTCG
ATCGTGGCAG ACGGCAAGGG CGGCTACTTG CTCGCCGAGG GCGGGCGCAA TCGCGTGCTG
CACCTGACCC CGCCACCGAC GCGCGACACC GCCCAGCGCG ACTGA
|
|---|
| Protein sequence | MPHILRKRST RIALTATTGL LVATLGFFAW QSFYPVQAAS GWDVEVLHRD VTKAASLLPQ
ADGSLLVSRE LDDGRGSILK ITASGDRVVV IDNLSKPDGM VAAQDGWVFS QEGGQAPVSL
SRDGQVTHLF DGESVQGLWN DGDHLFAIED RKGNGRLMRY DWNSGQLDVL RSGLTETEGL
TRCSDGRLLY TEKANGKVRA LSDDGRDPVV VDGLRNPTFL YCDQRGLWIS EDNTHRARLL
LIDADGVQHT MLTFLKAPQS IVADGKGGYL LAEGGRNRVL HLTPPPTRDT AQRD
|
|---|
| |