| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2398 |
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| Symbol | |
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| ID | 5870187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2683615 |
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| End bp | 2684595 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641547521 |
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| Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
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| Protein accession | YP_001668633 |
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| Protein GI | 167033402 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.593949 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCCC GCACCTTCTC TCCCCTACGC CGTCTGCTGA TCGGCGGATT GCTGGCCAGT
GTCGCCAGCG CCTTGCTGCC CTGGTCCGAA GCCATTGCCG ATGACGCCAA GACCCTGCGC
ATCGGTTACC AGAAGTTCAA CAGCATCAAC ATCCTCAAAG GCAGCGGCGC GCTGGAGAAG
GCCCTGGCAC CGCAAGGCGT GAACGTGAGC TGGCACGAGT TTGCCGCCGG CCCGCAGTTG
CTCGAAGCGC TGAGCACTGG CGCCATCGAC CTCGGCCACG CTGCCGACGC CCCGTCGGTA
TTCGCCCAAG CCGCAGGCAA GCCGGTGGTG TACCTGGCTG CCGAACAACC GTATCCACGC
GGCATCGGCC TGGTGGTGCG CGAGCAGGAC CACCTGGCCA GCGTGCAGGA CCTCAAAGGC
AAGCGCGTGG CTACCGGCCG TGGCTGGAAT GCCCAGTACC TGCTGGCCGT CGCGCTGGAA
CAAGCGGGCC TCAGCTATCA GGACATCACC CCCGCCTACG TCAACAATGC CGCCGATGCC
GTGGCCGCGC TGCAATCGGG CAGTGTCCAG GCGGTGACCC TGTGGGACCC GTTCCTCGCC
GCCGCAGAAA GCCAACCAGG GCTGAAAAAC CTGCGCGACG GCAGCGGCCT GTCCAACAAC
CGCACCTTCT ACCTGTCCAC CGCCAGCTAT GCCGACCAGC ACCGTGCGCT GCTGAAGACC
TTCTTTACCG AACTGGGCAA GGTCAGCCAG TGGGCCAACG CCAAGCCAGC CGAAGTCGCC
GCGCTGCTGG CTCCGCAGCT GGGTATCAGC GCCAACGTGT TGGAAGTGGC CAGCGAACGG
CGCAACTACA ACGCCGTGGC CATTACCCCG CAGATCGTTG CCGAACAACA GAAGCTGGCC
GATACCTTCC AGGGCCTAGG CCTGATTCCA CGCAAGCTGC AGGTGGCCGA TGCGGTCTAC
CCGGCTTCCG TGTTGCCTTG A
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| Protein sequence | MPARTFSPLR RLLIGGLLAS VASALLPWSE AIADDAKTLR IGYQKFNSIN ILKGSGALEK
ALAPQGVNVS WHEFAAGPQL LEALSTGAID LGHAADAPSV FAQAAGKPVV YLAAEQPYPR
GIGLVVREQD HLASVQDLKG KRVATGRGWN AQYLLAVALE QAGLSYQDIT PAYVNNAADA
VAALQSGSVQ AVTLWDPFLA AAESQPGLKN LRDGSGLSNN RTFYLSTASY ADQHRALLKT
FFTELGKVSQ WANAKPAEVA ALLAPQLGIS ANVLEVASER RNYNAVAITP QIVAEQQKLA
DTFQGLGLIP RKLQVADAVY PASVLP
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