| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2394 |
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| Symbol | |
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| ID | 5870183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2679120 |
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| End bp | 2680538 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641547517 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001668629 |
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| Protein GI | 167033398 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACCAA CGTGCAACGC GCAAAGCGCA GTTCCAGAAG AAAGCCGTGT GCTCAAACGG
CGGCTGGAAA ACCGGCACAT ACAGCTCATT TCCATCAGTG GTGCGATTGG TACCGGCCTG
TTCATGGGTT CGGGCAAGAT CATTGCGCTG TCTGGCACCT CGATCATCCT CGTCTACGCC
ATCATCGGTT TTTTCGTGTT CTGCATCATG CGCGCCATGG GCGAGATGCT GCTGGCCAAC
CTGCAGATGG AATCGTTCGC CGACCTGGTG CACAACTACC TGGGCCCACG GGCCGGTTAC
ATTCTCAGCT GGTCGTACTG GCTCAGCTGG GTAGTGGCAG CGGTGGGTGA CGTGGTGGTG
GTCGCGGGGT TCGTGCAGTA CTGGTACCCC GATGTGCCCA CCTGGCTACC GGCCTTCGGT
ACCATGTTCC TGCTGCTGGG GCTGAACATG CTGGCGGTGA AGGCCTTTGG CGAAGTGGAG
TTCTGGTTTG GCCTGATCAA GATCGTCGCC ATCGTGCTGT TGGTGGTGAC CGGCCTGGTA
ATGGTCGCGA CCTCCTACAC TTCGCCGGCA GGGGTAACCG CCTCGTTCAG CCACCTGGTA
GCACCGGGCG TGGTCATGCC ACATGGCATC CTGGGCTTTC TCGCCGGGTT TCAGATCGCC
ATCTTCTCCT TTGTCGGCAC CGAGCTGATC GGCACCGCAG CGGCGGAGGC CAAAGACCCG
GAGAAGACCC TGCCCAAGGC AATCAACACC ATCCCCGTGC GCATCCTGTT GTTCTACATC
TGTTCGCTGG TGTGCATCAT CAGTGTGGTC TCCTGGGCCA ATGTGCCGGC CAACCGCAGC
CCATTCGTTG AACTGTTCCT GCTTGGCGGG TTGCCCGCAG CCGCTGGCAT CATCAACTTC
GTGGTGCTGA CGTCGGCTGC GTCGTCGGCC AACAGCGGTG TCTACTCGGG CTCGCGGATG
CTCTACGGCC TGTCACATCA GCAGCAGGCG CCTGTGGCGT TCGGGCGGCT GTCCGGCTCG
GGTACGCCCG TGCGGGCGCT GGTGTTCTCG GGGGTGTGCA TGGCGATTGC CTTGACGCTG
CTGTTCGTGA TTCCAGAAGT GATGACCGTG TTTACCCTGG TGTCGACCAT CTCCGCAGTG
ATGATCATCG TTACCTGGTC ACTGATCCTG CTGTCCTACT TCGCTTACCG TCGGCAGAAT
CCGCAGGCCC ATGAGCGGTC CAGGTTCAAG CTGCCAGGTG GCAAGGCCAC CGCTGCGCTG
GCGCAGCTGT TTCTGATCTT CGTGCTGTGC CTGCTGGCCC TGGAACCGGA CACCCGCACG
GCGTTGTACG TGATGCCGTT GTGGTACGCG GGCCTGCTGC TGGCCTACCG GCGCCGGGCC
AAGGCATGTA TGCGGCCACA GGCAGCTACC GCCGCCTAG
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| Protein sequence | MQPTCNAQSA VPEESRVLKR RLENRHIQLI SISGAIGTGL FMGSGKIIAL SGTSIILVYA
IIGFFVFCIM RAMGEMLLAN LQMESFADLV HNYLGPRAGY ILSWSYWLSW VVAAVGDVVV
VAGFVQYWYP DVPTWLPAFG TMFLLLGLNM LAVKAFGEVE FWFGLIKIVA IVLLVVTGLV
MVATSYTSPA GVTASFSHLV APGVVMPHGI LGFLAGFQIA IFSFVGTELI GTAAAEAKDP
EKTLPKAINT IPVRILLFYI CSLVCIISVV SWANVPANRS PFVELFLLGG LPAAAGIINF
VVLTSAASSA NSGVYSGSRM LYGLSHQQQA PVAFGRLSGS GTPVRALVFS GVCMAIALTL
LFVIPEVMTV FTLVSTISAV MIIVTWSLIL LSYFAYRRQN PQAHERSRFK LPGGKATAAL
AQLFLIFVLC LLALEPDTRT ALYVMPLWYA GLLLAYRRRA KACMRPQAAT AA
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