Gene PputGB1_2393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2393 
Symbol 
ID5870182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2678354 
End bp2678776 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content61% 
IMG OID641547516 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001668628 
Protein GI167033397 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACTA TTGATCGGGA ACTGATTGCA CTGTTGCGGG ACAATGCACG CACCCCCGTG 
CTGACCCTGG CAAAGAAGCT CAAGGTGGCA CGGGCAACCG TGCAAAACCG TATTACCCGG
CTCGAAGAGC AGGGCGTGAT CATCGGCTAC ACGGTACGCC TGCGCTCCGA TGCGCTGGAG
CAGGGCGTGC GCGCAATCAC CAGCATCGGT ATCAGCGGCC ACCACGCCGC AGAGGTCAAG
CACGCGCTGC GTGGGCACCC CAACGTGGTG GCCATCCATA CCACCAATGG CCGCTGGGAC
CTGATGGCCG AGCTGCGCGC CGACACCCTC GAGGCCTTCG ACCGGGCGTT GAACACCATT
CGCTCGATAC CACACATCGA AAACACCGAG ACCAGCATTC TGCTTTCGAC CTACAAGATG
TGA
 
Protein sequence
MDTIDRELIA LLRDNARTPV LTLAKKLKVA RATVQNRITR LEEQGVIIGY TVRLRSDALE 
QGVRAITSIG ISGHHAAEVK HALRGHPNVV AIHTTNGRWD LMAELRADTL EAFDRALNTI
RSIPHIENTE TSILLSTYKM