Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2393 |
Symbol | |
ID | 5870182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2678354 |
End bp | 2678776 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641547516 |
Product | AsnC family transcriptional regulator |
Protein accession | YP_001668628 |
Protein GI | 167033397 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACTA TTGATCGGGA ACTGATTGCA CTGTTGCGGG ACAATGCACG CACCCCCGTG CTGACCCTGG CAAAGAAGCT CAAGGTGGCA CGGGCAACCG TGCAAAACCG TATTACCCGG CTCGAAGAGC AGGGCGTGAT CATCGGCTAC ACGGTACGCC TGCGCTCCGA TGCGCTGGAG CAGGGCGTGC GCGCAATCAC CAGCATCGGT ATCAGCGGCC ACCACGCCGC AGAGGTCAAG CACGCGCTGC GTGGGCACCC CAACGTGGTG GCCATCCATA CCACCAATGG CCGCTGGGAC CTGATGGCCG AGCTGCGCGC CGACACCCTC GAGGCCTTCG ACCGGGCGTT GAACACCATT CGCTCGATAC CACACATCGA AAACACCGAG ACCAGCATTC TGCTTTCGAC CTACAAGATG TGA
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Protein sequence | MDTIDRELIA LLRDNARTPV LTLAKKLKVA RATVQNRITR LEEQGVIIGY TVRLRSDALE QGVRAITSIG ISGHHAAEVK HALRGHPNVV AIHTTNGRWD LMAELRADTL EAFDRALNTI RSIPHIENTE TSILLSTYKM
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