| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2388 |
|---|
| Symbol | |
|---|
| ID | 5870177 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 2672466 |
|---|
| End bp | 2673119 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641547511 |
|---|
| Product | ankyrin |
|---|
| Protein accession | YP_001668623 |
|---|
| Protein GI | 167033392 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0666] FOG: Ankyrin repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.751385 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTTAT CAATTGCCGC GACGCTGTTT GCCCTGTGCA CCAGCCTTGC CACCCACGCC
GAGACCCGCA CTGTGGACAA CCGCCTGCAC AACGCCGCCC GCCACGATGA CGTGCGCACT
TTGCAACAAT TGCTGGGGCA AGGTGCCCGG CTGGACAGCC GTGATGAGCA AGGGCGCACT
GCCCTGCTGG TGGCGACCCA CGGCAACCAG CTGGCGGCGG CGAAAGCCCT GATCGAAGCC
GGGGCCGATG TGAATGCCAA GGACAACATC GACGACAGCC CCTACCTGTA TGCTGGCGCC
CGGGGCCTGA ACGACATCCT GCGGCTGACC CTGCGCCACG GGGCGGACCT CAAGAGCACC
AATCGTTACG GCGGCACCGC GCTGATTCCG GCTGCCGAGC GCGGGCATGT CGAGACCGTG
CAAATGTTGA TTGATGCCGG CGTTGACGTG AACCACCTTA ACCAGCTGCA CTGGACCGCG
CTTATGGAGG CCGTGGTGCT GGGCAATGGC GGGCCGCGGC ATGTGGAGGT CGTGCGGCGG
TTGCTGGCGG CCGGGGCGGA TCGGCAGATT GCCGACAAGG ACGGGGTGAC CGCGCTGGAG
CATGCGCGGC AGCGGGGGTA TCGGCAGATG GAGATGCTGC TGGCCCACGA GTAA
|
|---|
| Protein sequence | MRLSIAATLF ALCTSLATHA ETRTVDNRLH NAARHDDVRT LQQLLGQGAR LDSRDEQGRT
ALLVATHGNQ LAAAKALIEA GADVNAKDNI DDSPYLYAGA RGLNDILRLT LRHGADLKST
NRYGGTALIP AAERGHVETV QMLIDAGVDV NHLNQLHWTA LMEAVVLGNG GPRHVEVVRR
LLAAGADRQI ADKDGVTALE HARQRGYRQM EMLLAHE
|
|---|
| |