| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2385 |
|---|
| Symbol | |
|---|
| ID | 5870174 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 2669711 |
|---|
| End bp | 2670109 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641547508 |
|---|
| Product | MerR family transcriptional regulator |
|---|
| Protein accession | YP_001668620 |
|---|
| Protein GI | 167033389 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0789] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.857198 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCC AGACCTACAG CATCTCCGAC CTGTCCCGCG AGCTGGACAT CACCACCCGC
GCGATTCGCT TCTACGAGGA ACAGGGCCTG TTGAGCCCAG AGCGCCGTGG CCTGGAGCGT
ATCTACTCGC CGCGCGACAA GGTCAGCCTG AAGCTCATCC TGCGCGGCAA GCGCATCGGC
TTTTCTTTGG CCGAGTGCCG CGAGCTGATC GAGCTGTACG ACCCCACCAG CGGCAACCTC
AAGCAGCTCA ACAGCATGCT GGCGAAAATC GCCGAGCGTC GCGCCCAGCT GGAGCAGCAG
ATGCTCGACA TTCACCAGAT GCAACTGGAA CTGGACACCG CCCAGGAGCG CTGCGAACAA
GCCCTGGCCG CCACCCTGAA CAACAAAGAC AACCGCTGA
|
|---|
| Protein sequence | MSTQTYSISD LSRELDITTR AIRFYEEQGL LSPERRGLER IYSPRDKVSL KLILRGKRIG
FSLAECRELI ELYDPTSGNL KQLNSMLAKI AERRAQLEQQ MLDIHQMQLE LDTAQERCEQ
ALAATLNNKD NR
|
|---|
| |