Gene PputGB1_2355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2355 
Symbol 
ID5870144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2634353 
End bp2635552 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content66% 
IMG OID641547479 
Productmajor facilitator transporter 
Protein accessionYP_001668591 
Protein GI167033360 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.235883 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCCT CCCTTGCGGC AGCGCAACCG GCAGCTGCCA GCCTGAGCCG GGCCCTGGTC 
GTGCTACTGG CATTCTGCTG CGGCGCGATC GTCGCCAACA TCTACTATGC CCAGCCCATC
GTCGGGCTGA TTGCCCCAGA CTTGGGGCTA TCCACCGAGC ATGCCAGCCT GATCGTTTCC
CTTACCCAAC TGGGTTATGC CCTGGGCCTG TTGTTGCTGG TGCCGCTGGC CGACCTGCTG
GAAAACCGCC GCCTGATGGT GGCTACCGCT GTCCTGGCCT GTGTCAGCCT GCTGCTGGCG
GGCACCAGCA GCAGTGGTCA AGGGCAGTTG TTCCTGGGTT ACGCACTGCT GATCGGTTTC
AGTTCTGTGT CGGTGCAGAT GCTTATCCCG CTGGCGGCGC ACCTGGCGCC GGAACAGCAG
CGTGGCCGGG TGGTGGGTAA TATCATGGGC GGCCTGCTGC TGGGTATCCT GCTGGCGCGC
CCGGTTTCGA GCCTGGTGGC TGACCACTTT GGCTGGCGCG CGGTGTTCAT TGGCGCCGCC
GGAGTCATGC TGGCGATCAT CCTGTTGCTG GCGCTGACCC TGCCGCAGCG TCGTCCCGAG
CACAAGGCCA GCTATGCCGG GCTCATGCTG TCGCTGCTCA CTCTGCTGCG CCGTTATCCA
CTGCTGCGCC AGCGTTCGTT GTACCAGGCG TTGATGTTCG CAGCGTTCAG CCTGTTCTGG
ACGGCCGTGC CGATGGCCCT GGCCAGTGAA CACGGCCTGT CGCAGAGCCA TATCGCCGTG
TTCGCCCTGG TCGGTGCAGT GGGCGCCATC GCTGCGCCCA TGGCCGGGCG CCTGGCGGAT
GCCGGGCATG CCCGCGCCGG CTCGCTGTTG GCGCTGATGC TGGCGCCGGT GGCCTTGCTG
CTGGGGCTAT CAAGCCCGGG TTACAGCGTG ATCGGCCTGG GCCTTACCGG CGTGCTGCTG
GACTTTGCGG TGCAGATGAA CATGGTCATT GGCCAGCGCG AAGTGTACGC ACTGGACCCG
GCCAGCCGCG GGCGGCTGAA CGCGGTGTAC ATGACCAGCA TCTTCCTTGG CGGGGCGCTG
GGGTCGGCGG TGGCCAGCGC GTTGTTCAGC CAGTTTGGCT GGCAGGGGGT GGCGCTGGTG
GGGGCAGGCT TGCCGGGTGT TGCGTTGCTG GTCTTCCTGC TGAAGGCCCG GCGCGCCTGA
 
Protein sequence
MNPSLAAAQP AAASLSRALV VLLAFCCGAI VANIYYAQPI VGLIAPDLGL STEHASLIVS 
LTQLGYALGL LLLVPLADLL ENRRLMVATA VLACVSLLLA GTSSSGQGQL FLGYALLIGF
SSVSVQMLIP LAAHLAPEQQ RGRVVGNIMG GLLLGILLAR PVSSLVADHF GWRAVFIGAA
GVMLAIILLL ALTLPQRRPE HKASYAGLML SLLTLLRRYP LLRQRSLYQA LMFAAFSLFW
TAVPMALASE HGLSQSHIAV FALVGAVGAI AAPMAGRLAD AGHARAGSLL ALMLAPVALL
LGLSSPGYSV IGLGLTGVLL DFAVQMNMVI GQREVYALDP ASRGRLNAVY MTSIFLGGAL
GSAVASALFS QFGWQGVALV GAGLPGVALL VFLLKARRA