Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2349 |
Symbol | |
ID | 5870138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2626962 |
End bp | 2627639 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641547473 |
Product | hypothetical protein |
Protein accession | YP_001668585 |
Protein GI | 167033354 |
COG category | [S] Function unknown |
COG ID | [COG3342] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTCT CCATCATTGG CCGCTGCCAG GAAACCGGCC AGGTCGGCAT CGCCATCAGC TCGTCGAGCA TCGCCGTAGG CGCCCGTTGC CCGTGGGTGC GCGCCGGTGT AGGCGCGGTC TCTACCCAGA ACATCACCCT GCCGGCACTG GGCCCGCAGA TTCTCGATGC CATGGAGCAA GGCCAGTTGC CACCCGCCGC GGCCCTGGAC CGGGTGCTGA GTGCCAACGG CTGGAGTGAG TATCGCCAGG TCACGGTGAT CGACAGCCAG GGGCAAGTGG CGCTGTTCAC GGGGCGCGAA GCGCTGGGTA CACACAATGC GGTGGCCGGC GAACACTGCG CAGCGGCGGG CAACCTGCTG TCTTCTACCC AGGTAATAGA GGCCATGGTG CTGGCTTTCG AGCAGGCGGG TGGGCACCTG GCCGACCGCC TGCTGGCGGC CATGCACGCG GCGATGGCCG CCGGTGGCGA AGCCGGGCCG GTGCACTCGG CGGCGTTGAA GATTGCTGGC GAACTGACCT GGCCACTGGT GGACCTGCGC GTCGACTGGG CCGATGCAGA CCCGATCGGT GTGCTCGATG GCTTGTGGCA AGCCTATCGG CCACAGATGC AGGACTATGT CACCCGCGCC CTCAACCCGA CCGCCGCGCC AAGCTACGGG GTGCCAGGCG ATGAGTGA
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Protein sequence | MTFSIIGRCQ ETGQVGIAIS SSSIAVGARC PWVRAGVGAV STQNITLPAL GPQILDAMEQ GQLPPAAALD RVLSANGWSE YRQVTVIDSQ GQVALFTGRE ALGTHNAVAG EHCAAAGNLL SSTQVIEAMV LAFEQAGGHL ADRLLAAMHA AMAAGGEAGP VHSAALKIAG ELTWPLVDLR VDWADADPIG VLDGLWQAYR PQMQDYVTRA LNPTAAPSYG VPGDE
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