| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2339 |
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| Symbol | |
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| ID | 5870128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2611950 |
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| End bp | 2614352 |
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| Gene Length | 2403 bp |
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| Protein Length | 800 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641547464 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001668576 |
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| Protein GI | 167033345 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCAG TAAAGTCTTG CCGCCCGCGC CCACTGGCGC GCGCAGCACA TCCGTTGTTT
GCGATGAGCC TGTTGTTGTG TGCACCGGCG TGGGCCGATG AGCCTGCCCG GCGTACCTAC
CAGGTAGCAC CCGCCAGCCT GGGCACCGCG TTGACCCACT TCGCCGACCA GGCTGGTGTC
AGCCTATCGC TGGACCCGGC ACTGGTCCAG GGCCGGCACA GCAGCGGTCT GTCCGGTAAC
TACAGTGTCG AAGAGGGCTT CTTGCAGCTG CTGCGCGACA GCGGTTTGCA GTTGATGCCG
GTGGGTGAGG GCGCCTTCAC CCTGGTACCA ACACAGTCCA GCGGCGCACT GGAAATCGCC
CCGACCAGCA TCGTCGGCGG CTTGGCTGCA GGTAGCGAAA CGCAGCCATA CGCCGGTGGC
CAGGTGGCGC GCCAGGGCGC TCAAGGCCTG CTGGGTTCGC GTGATTTCAT GGAAACCCCA
TTCAGCATCA CCAGCTACAC CAGCGAGCTG GTGAAGAACC AGCAGGCACG TACCTTGGGT
GAGTTGATTG CCAGTGATCC CTCGGTGCGC GCGACCAACC CGGCGGGTGG GCGTTTCGAG
CAGTTCACCA TTCGCGGCTT CAGCCTGTTC AACAGTGATG TGGCGTACAA CGGCCTATAC
GGCATCTTGC CGACCTACTC GATCGACATG GAAATGGCCG ACCGGGTCGA CATCATCAAA
GGCCCCAGCC AGTTGATCAA CGGCATTTCG CCCCGTGGCA GCGTGGGCGG CGGGATCAAT
GTGCAGCCCA AGCGGGCCGG CGACAAGCCG ATCACCGCGT TCACCGGCAG CTATGCGTCG
GCTGGGCAGG CAGGTGGCGC CGTGGACGTT GGTCGACGCT TTGGTGAAGG GCAGCAGTTC
GGCGTGCGTT TCAATGGGGT GAAGCAGGCC GGTGACACCG AATGGGACCA CCAGCGTGTC
GATCGCGAAA TGGCCGTGCT GGGCCTGGAT TTTCGCGGCG AGCGGCTGCG GCTTTCAGCG
GACCTCGGGC ATACCGAGCG TGATACCGAC GCGCCGCAGG AGCGTGTGCT GGTGGGTGCG
AATGCCAAGG TGCCGGATGC CAATGACGTA CGCCACAACT ACGCTCAGGC CTGGAGCAAG
GCGCGCACCA ACGACACCTT CGGTGCGCTG AACGCCGAGT ACGATATCAG CGAATCGCTG
CTGGCCTATG GGGCAGTCGG CGCGCGCAAG AGTAACCATG ACTTCCTGCG CCACAACGTG
TCTATTACCA ACGATGCCGG CGATTTCACC GTTCAGCCGC GCGATTTCAC TCGCGACGAA
TCGGTGCGCA CCGCCATGGC CGGCCTGCGC AGCTGGTTTC ATACCGGGCC GGTCAGCCAT
GAGCTGAACC TGGCCGCCAG CTATTTCTAC ATGGACTTCA CCAACGGCGG TGCGCGTTAT
GCCTCGGCGC CGAGCAACCT CTACAACCCG GTTGCCACCC CGACACCGGG TACGCCAACC
CGCATCGACC CGCAGGTTTA CACGGAGAAC CGCTTCTCCG GCGTGGCCCT GGCCGACACG
CTGGGCTTTT TCGCCGACCG TCTGCTGCTG ACCCTGGGGG CGCGCTGGCA GCGGGTGCAG
GTGGATGACT GGAGCGACGG CATCAAAGGC GACACGGCCT ATGACGAAGA AAAGGTCTCA
CCGTCGGGTG GCGTGTTGCT CAAGGTGACC GACCAGCTGT CGTTGTACGC CAACTACATG
GAGGGCCTGA GCCAAGGCAA GATCGCGCCA TCGACCTCGA TCAACGAGGA CCAGATTTTC
CCGCCGTTCA CCAGCCGCCA GGTTGAGGTA GGGGCCAAGT ACGATTTTGG CCAGGTGGCG
TTCACAGCCA GCGCCTTCCG CATTCGCCAG CCGGCCTACG AAACCAACGC CACCTCGCGG
GTGTTCGGCC CCAACGGCAA GCGCGACAAC CGTGGGATCG AGCTGAGTGT GTTTGGTGAG
CCTGTACAGG GGGTGCGCGT ACTGGGTGGG GTGATGTACA TCGACAGCGA GCTTACCGAT
ACCGTGGGTG GCGCCTTCGA TGGCAACCGC GCGCCAGCGA CGCCCGAATA CAACGTCAAT
CTCGGTGCCG AGTGGGATGT GCCGGGCGTG AACGGCCTAA CCCTGACGGC GCGGGGCATT
CATTCCAGTT CGCAGTACCT GGACCAGAAC AACAGCAAGC AGATCGACGG CTGGGAGCGG
TATGACCTGG GGGCGCGCTA TGCCTTCAAG GTGGATGCTG CCGAGGTGAC CTTGCGTGCC
AGTGTCGAGA ATGTGCTGGA TGACCGTTAC TGGAGCTCGG CGGGGGCTTC GGATGACAGT
GAGCCCGGCT TGACCCTTTC CACACCGCGC ACCTACTTGC TGTCGGCCAC AGTAGGTTTT
TAA
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| Protein sequence | MPAVKSCRPR PLARAAHPLF AMSLLLCAPA WADEPARRTY QVAPASLGTA LTHFADQAGV
SLSLDPALVQ GRHSSGLSGN YSVEEGFLQL LRDSGLQLMP VGEGAFTLVP TQSSGALEIA
PTSIVGGLAA GSETQPYAGG QVARQGAQGL LGSRDFMETP FSITSYTSEL VKNQQARTLG
ELIASDPSVR ATNPAGGRFE QFTIRGFSLF NSDVAYNGLY GILPTYSIDM EMADRVDIIK
GPSQLINGIS PRGSVGGGIN VQPKRAGDKP ITAFTGSYAS AGQAGGAVDV GRRFGEGQQF
GVRFNGVKQA GDTEWDHQRV DREMAVLGLD FRGERLRLSA DLGHTERDTD APQERVLVGA
NAKVPDANDV RHNYAQAWSK ARTNDTFGAL NAEYDISESL LAYGAVGARK SNHDFLRHNV
SITNDAGDFT VQPRDFTRDE SVRTAMAGLR SWFHTGPVSH ELNLAASYFY MDFTNGGARY
ASAPSNLYNP VATPTPGTPT RIDPQVYTEN RFSGVALADT LGFFADRLLL TLGARWQRVQ
VDDWSDGIKG DTAYDEEKVS PSGGVLLKVT DQLSLYANYM EGLSQGKIAP STSINEDQIF
PPFTSRQVEV GAKYDFGQVA FTASAFRIRQ PAYETNATSR VFGPNGKRDN RGIELSVFGE
PVQGVRVLGG VMYIDSELTD TVGGAFDGNR APATPEYNVN LGAEWDVPGV NGLTLTARGI
HSSSQYLDQN NSKQIDGWER YDLGARYAFK VDAAEVTLRA SVENVLDDRY WSSAGASDDS
EPGLTLSTPR TYLLSATVGF
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