Gene PputGB1_2335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2335 
Symbol 
ID5870124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2607898 
End bp2608545 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content62% 
IMG OID641547460 
Producthypothetical protein 
Protein accessionYP_001668572 
Protein GI167033341 
COG category[S] Function unknown 
COG ID[COG4291] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTCC ACCGCCTGAC CCGCACACAC CCTCGCCTGA GCCTCGCCGC AGCAGTTGGC 
CTTGTTGGCG CCTGGTTGAT CCCAGCTGGC GATACCGTGC AGCACATCCT CGCCGGCTGG
AACCTAGGCG TATGGCTGTA CCTGCTGCTG GTGCTGTACC TGAGCTGGAA CGCAGGCCCC
GATAAAGTCC GCAAGGTCGC CCGTGTCGAA GACGAAAACG CGGGCATAGT CCTGCTGACC
GTGTGCATCG CCGCCATCGC CAGCCTTGCC GCGGTCACCC TGCAACTGGT TTCCAGCCGC
GGCCTGCAAG GCACACCGCT GGCCCTGCAC TACCTTTACA CCGGCCTGAC CGTAGCCGGT
TCCTGGCTGC TGATCGGCTG CATCTTCAGC CTGCACTACG CGCGGCTGTT CTACACCGGG
CAAAACCACG AACCGCCTCT GCGCTTCGCT GATGGCGAAC GCAACCCGGA TTACTGGGAC
TTTCATTACT TCTCGTTCAC CATCAGCGTC GCGGTGCAAA CGTCTGACGT GGGCGTCGCA
GGGCGAGGAT TACGCCGGGT GGTGCTGGCG CATTCATTGG TGGGGTTCGT GTTCAATACG
GCCATTTTGG GGTTCACCAT CAATATCGCC GCCGGGCTGC TGGGTTGA
 
Protein sequence
MAFHRLTRTH PRLSLAAAVG LVGAWLIPAG DTVQHILAGW NLGVWLYLLL VLYLSWNAGP 
DKVRKVARVE DENAGIVLLT VCIAAIASLA AVTLQLVSSR GLQGTPLALH YLYTGLTVAG
SWLLIGCIFS LHYARLFYTG QNHEPPLRFA DGERNPDYWD FHYFSFTISV AVQTSDVGVA
GRGLRRVVLA HSLVGFVFNT AILGFTINIA AGLLG