Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2335 |
Symbol | |
ID | 5870124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2607898 |
End bp | 2608545 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641547460 |
Product | hypothetical protein |
Protein accession | YP_001668572 |
Protein GI | 167033341 |
COG category | [S] Function unknown |
COG ID | [COG4291] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTTCC ACCGCCTGAC CCGCACACAC CCTCGCCTGA GCCTCGCCGC AGCAGTTGGC CTTGTTGGCG CCTGGTTGAT CCCAGCTGGC GATACCGTGC AGCACATCCT CGCCGGCTGG AACCTAGGCG TATGGCTGTA CCTGCTGCTG GTGCTGTACC TGAGCTGGAA CGCAGGCCCC GATAAAGTCC GCAAGGTCGC CCGTGTCGAA GACGAAAACG CGGGCATAGT CCTGCTGACC GTGTGCATCG CCGCCATCGC CAGCCTTGCC GCGGTCACCC TGCAACTGGT TTCCAGCCGC GGCCTGCAAG GCACACCGCT GGCCCTGCAC TACCTTTACA CCGGCCTGAC CGTAGCCGGT TCCTGGCTGC TGATCGGCTG CATCTTCAGC CTGCACTACG CGCGGCTGTT CTACACCGGG CAAAACCACG AACCGCCTCT GCGCTTCGCT GATGGCGAAC GCAACCCGGA TTACTGGGAC TTTCATTACT TCTCGTTCAC CATCAGCGTC GCGGTGCAAA CGTCTGACGT GGGCGTCGCA GGGCGAGGAT TACGCCGGGT GGTGCTGGCG CATTCATTGG TGGGGTTCGT GTTCAATACG GCCATTTTGG GGTTCACCAT CAATATCGCC GCCGGGCTGC TGGGTTGA
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Protein sequence | MAFHRLTRTH PRLSLAAAVG LVGAWLIPAG DTVQHILAGW NLGVWLYLLL VLYLSWNAGP DKVRKVARVE DENAGIVLLT VCIAAIASLA AVTLQLVSSR GLQGTPLALH YLYTGLTVAG SWLLIGCIFS LHYARLFYTG QNHEPPLRFA DGERNPDYWD FHYFSFTISV AVQTSDVGVA GRGLRRVVLA HSLVGFVFNT AILGFTINIA AGLLG
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