| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2332 |
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| Symbol | |
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| ID | 5870121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2603526 |
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| End bp | 2605016 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641547457 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001668569 |
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| Protein GI | 167033338 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTTTG CCCAGACCCC ACTTCACCGC GCCCTGCAAG CGCTGACCCG TGGGCGTGGC
TCGCGCCTGC TCGGCGCCGG GCTGTGCGTG GCCTTGCTCA GTGCCTGCAC ACTGAGCCCG
GACTACCACC GCCCCGAGCT GAACAGCTCG GCGGCGCAGT TCAAGCACGC CGAAGGCTGG
ACCCAGGCCT CGCCGTCCGA TGCCATCGCC CGCGGCGCCT GGTGGGAAAT CTACGGCGAT
GCCGGGCTCA ATGCGCTGGT CGAGGAGCTT AACCGCAGCA ACCAGACCGT GGCGCAATCA
GAAGCCCAGT ACCGTCAGGC CCAGGCGCTG GTGCGCAGCA GCCGTGCGGC GCTGTTCCCC
AGCCTGGACC TGAGCGCCAG CAAAAACCGC TCGGCGCAGG GTACCGGCAG CTCCAGTTCG
AGCCTTTCCA ACAACAGCAG TGGCATTCGC AACACCTACA ACGCGCAGTT GGGCGTGAGC
TGGGAAATCG ACCTGTGGGG CAAGCTGCGG GAAACCATGA ATGCCAACGA GGCCAGTGCC
GAAGCCAGCT TCGCCGACCT CGCTTCGATC CGCCTGAGCC AGCAATCGGA GCTGGTGCAG
AATTACCTGC AATTGCGCGT TATAGACGAG CAGAAACGCT TGCTGGAAGC CACCGTGGCG
GCCTACGAGC GCTCGCTGCG CATGAACGAG AACCAGTACC GTGCCGGTGT CGCTGGCCCT
GATGCCGTGG CCCAGGCCCG CACCCAGCTC AAAAGCACCC AGGCCGACCT GATCGACCTG
ATCTGGCAGC GCGCGCAGTT CGAGAACGCC ATTGCCGTGC TGCTGGGCAA GGCCCCCGCC
GACTTTGCCC TGGCCGACAG CAAGGCGATT CCGGCACTGC CGCAAATACC GGTTTCACTG
CCTTCGCAAC TGCTGGAGCG GCGCCCGGAT ATCGCGGCGG CCGAACGTAA TGTGATGGCG
GCCAACGCCA ACATTGGCGT GTCGCGGGCA GCGTACTTCC CGGACCTCAG CCTGAGCATG
AGTGGCGGTT ATTCCAGCAG CAGCTTCAGC AACTGGATCG AGCTGCCCAA CCGCTATTGG
TCGGTAGGCC CGCAGCTGGC GCTGACTCTG TTCGACGCTG GCAAACGCAG CGCCGAGGTC
GACCGCACGG TGGCAGTGTA TGACCAGACC GTTGCGCAGT ATCGCCAGAC GGTGCTGGAC
GGCTTCAAGG AAGTGGAAAA CCTGCTGGTG CAGTTGAAGG TGTATGGCGA TGAAGCCGTG
GTGCGCCAGG AAGCGCTGGA TGCCGCCCGC GAGTCGCTGC GCCTGACCGA GAACCAGTAC
CGCGCCGGGC TGATCGGCTA CCTGGATGTG GTCAACGTGC AGACCACGGC GCTGAGCAAC
GAGCGCAGTG TGTTGAACCT GCTGCAAGGG CGCCTGGTGG CCAGCGTGCA ACTGGTGGCT
GCGCTGGGCG GCGGCTGGGA TGCCGAGCAA GCCTTTGCCG AGCAGGACTG A
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| Protein sequence | MTFAQTPLHR ALQALTRGRG SRLLGAGLCV ALLSACTLSP DYHRPELNSS AAQFKHAEGW
TQASPSDAIA RGAWWEIYGD AGLNALVEEL NRSNQTVAQS EAQYRQAQAL VRSSRAALFP
SLDLSASKNR SAQGTGSSSS SLSNNSSGIR NTYNAQLGVS WEIDLWGKLR ETMNANEASA
EASFADLASI RLSQQSELVQ NYLQLRVIDE QKRLLEATVA AYERSLRMNE NQYRAGVAGP
DAVAQARTQL KSTQADLIDL IWQRAQFENA IAVLLGKAPA DFALADSKAI PALPQIPVSL
PSQLLERRPD IAAAERNVMA ANANIGVSRA AYFPDLSLSM SGGYSSSSFS NWIELPNRYW
SVGPQLALTL FDAGKRSAEV DRTVAVYDQT VAQYRQTVLD GFKEVENLLV QLKVYGDEAV
VRQEALDAAR ESLRLTENQY RAGLIGYLDV VNVQTTALSN ERSVLNLLQG RLVASVQLVA
ALGGGWDAEQ AFAEQD
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