| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2330 |
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| Symbol | |
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| ID | 5870119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2597327 |
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| End bp | 2600425 |
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| Gene Length | 3099 bp |
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| Protein Length | 1032 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641547455 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001668567 |
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| Protein GI | 167033336 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.290618 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTCT CGCGTCTGTT CATCCTGCGG CCGGTCGCCA CCACGCTGAG CATGCTGGCC
ATTGTCCTGG CCGGCCTGAT CGCCTACAAG CTGCTGCCGG TGTCCGCATT GCCGCAGGTG
GACTACCCGA CCATCCGCGT GATGACCCTG TACCCTGGCG CCAGCCCGCA GGTCATGACC
AGCGCCGTCA CCGCGCCACT GGAGCGCCAG TTCGGCCAGA TGCCGGGCCT GGAGCAGATG
GCCTCGACCA GCTCCGGTGG CGCGTCGGTG CTGACCCTGC GCTTCAACCT CGACATGAAC
ATGGACGTTG CCGAGCAACA GGTGCAGGCC GCGATCAACG CCGCCAGCAA CCTGCTGCCC
AGCGACTTGC CGGCACCGCC GGTGTACAAC AAGGTCAACC CGGCCGACAC CCCGGTGCTG
ACCTTGGCCA TCTCCAGCAA GACCATGCCG CTGCCCAAGC TCAACGACCT GGTCGATACC
CGCGTGGCGC AAAAGCTCGC GCAGATCAGC GGCGTGGGCA TGGTCAGCAT TGCCGGCGGC
CAGCGCCAGG CGGTGCGGAT CAAGGTCAAC GTCGACGCTC TGGCGGCCAA CGGCCTGAAC
CTGGACGACG TGCGTACCCT GATCGGCGCT TCCAACGTCA ACCAGCCCAA AGGCAACTTC
GACGGCCCGA CACGGGTGTC GATGCTCGAT GCCAACGACC AACTGCGTTC CCCCGAGGAA
TACGCCAACC TGATTCTGGC CTACAACAAT GGCGCTCCGC TGCGCCTGAA AGACGTAGCC
GAAATCGTCG ACGGCGCCGA AAACGAACGC CTGGCCGCCT GGGCCAACGA AAACCACGCG
GTGCTGCTGA ACATCCAGCG TCAGCCGGGC GCCAACGTGA TCGAAGTGGT CGACCGCATC
AAGGACCTGC TGCCGTCGAT CACCGACAAC CTGCCGGCTG GCCTCGATGT CTCGGTGCTG
ACCGACCGCA CCCAGACCAT CCGCGCCGCG GTCAAGGACG TGCAACACGA ACTGCTGATC
GCCATCGTGC TGGTGGTGAT GGTCACCTTC GTCTTCCTGC GCCGCTTCAG CGCCACCCTC
ATTCCATCGA TTGCCGTGCC ACTGTCGCTG ATTGGCACCT TCGGGGTGAT GTACCTGGCC
GGTTTCTCGG TCAACAACCT GACGCTGATG GCCCTGACCA TTGCCACAGG CTTCGTGGTC
GATGATGCCA TCGTCATGCT GGAGAACATC TCCCGGCACA TCGAAGAGGG CGAGACCCCC
ATGCAGGCGG CGCTCAAGGG CGCCCGGCAG ATCGGCTTCA CCCTGATTTC GCTGACCTTC
TCGCTGATCG CCGTACTGAT CCCGCTGCTG TTCATGGCTG ACGTGGTCGG CCGCTTGTTC
CGCGAGTTCG CCATCACCCT GGCGGTGGCC ATCCTGATTT CCCTGGTGGT GTCGCTGACC
CTGACGCCGA TGATGTGCGC GCGCCTGCTC AAGCGTGAGC CCAAGGAAGA GGAACAAAGC
CGTTTCTACC GCGCCAGCGG TGCCTGGATC GACTGGCTGA TCAAGCACTA CGGCAGTGCC
CTGCAGTGGG TGCTGAAGCA CCAACCGCTG ACCCTGCTGG TGGCAGTGGC CAGCCTGGCG
CTGACGGTAT TCTTGTACAT GGTGGTGCCC AAAGGCTTCT TCCCGGTGCA GGACACCGGG
GTGATCCAGG GTATCTCCGA AGCGCCGCAG TCCACCTCGT TCGCCGCCAT GAGCGAGCGC
CAGCAGGCGC TGAGCAAGGT GATCCTGCAA GACCCTGCGG TGCAAAGCCT GTCGTCCTAC
ATCGGTGTCG ACGGCGACAA CGCCACGCTC AACAGCGGCC GCCTGCTGAT CAACCTCAAG
CCCCACGGCG AGCGCGATGT CACCGCCAGC CAAGTGATCA GCCGCCTGCA GCCGCAAGTC
GACCGGCTGG TGGGCATCCG TCTGTTCATG CAGCCGGTAC AGGACCTGAG CATCGAGGAC
CGGGTCAGCC GTACCCAGTA CCAGTTCAGT CTGTCGTCGC CGGACGCCGA CCTGCTGGCG
CAGTGGAGCG GCAAGCTGGT GCAGGCGCTG CAGCAGCGCC CGGAACTGGC CGACGTGGCC
AGCGATCTGC AGGACAAGGG CCTGCAGGTG TACCTGGTGA TCGACCGTGA CATGGCCAGC
CGCCTGGGCA TTACCGTGTC ACAAATCACC AACGCCCTGT ACGACGCCTT CGGCCAGCGG
CAGATCTCCA CCATCTACAC CCAGGCCAGC CAGTACCGCG TGGTGCTGCA GTCGCAGGAT
GCCGCCGTGA TTGGCCCGCA GGCGCTGGAG TCAATCCACG TCAAGGCCAC CGATGGCGGC
CAGGTGCGCC TGTCGGCGCT GGCGCGCATC GAGCAGCGTC AGGCGCAGCT GGCCATTTCC
CACATCGGCC AGTTCCCGGC GGTGATCCTG TCGTTCAACC TGGGGCACGG TGCATCGCTG
GGCGAGGCGG TGCAGGTGAT CGAGCAGGTG CAGAAGGACA TCGGCATGCC GCTGGGCGTG
CAAACCCGCT TCCAGGGCGC GGCCGAGGCT TTCCAGGCAT CGCTGTCGAG TACCTTGCTG
CTGATTCTGG CAGCGGTGGT GACCATGTAC ATCGTGCTGG GCGTGCTGTA CGAGAGCTAC
ATCCACCCGG TGACCATCCT CTCGACCTTG CCATCGGCAG CGGTGGGGGC CTTGCTGGCC
TTGCTCATCA GCGGCAACGA CCTGGGCATG ATTGCCATCA TCGGCATCAT CCTGCTGATC
GGCATCGTCA AGAAGAACGC GATCATGATG ATCGACTTCG CCCTGGAGGC TGAGCGCCAC
CAGGGCATGA GCCCGCGCGA TGCCATCTAC CAGGCGGCGC TGCTGCGCTT CCGGCCGATC
CTGATGACCA CCCTGGCCGC GCTGTTCGGT GCGGTGCCGC TGATGCTCGC CACCGGTTCC
GGTGCCGAAC TGCGCCAGCC GCTGGGCCTG GTGATGGTCG GTGGGCTGCT GGTCAGCCAG
GTGCTGACGC TGTTCACCAC CCCGGTCATC TACCTGTACT TCGACCGCCT GGCCCGCCGC
TGGCGCCCGG CCACTGACGT GAAGCAGGCC GAGGCATGA
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| Protein sequence | MNLSRLFILR PVATTLSMLA IVLAGLIAYK LLPVSALPQV DYPTIRVMTL YPGASPQVMT
SAVTAPLERQ FGQMPGLEQM ASTSSGGASV LTLRFNLDMN MDVAEQQVQA AINAASNLLP
SDLPAPPVYN KVNPADTPVL TLAISSKTMP LPKLNDLVDT RVAQKLAQIS GVGMVSIAGG
QRQAVRIKVN VDALAANGLN LDDVRTLIGA SNVNQPKGNF DGPTRVSMLD ANDQLRSPEE
YANLILAYNN GAPLRLKDVA EIVDGAENER LAAWANENHA VLLNIQRQPG ANVIEVVDRI
KDLLPSITDN LPAGLDVSVL TDRTQTIRAA VKDVQHELLI AIVLVVMVTF VFLRRFSATL
IPSIAVPLSL IGTFGVMYLA GFSVNNLTLM ALTIATGFVV DDAIVMLENI SRHIEEGETP
MQAALKGARQ IGFTLISLTF SLIAVLIPLL FMADVVGRLF REFAITLAVA ILISLVVSLT
LTPMMCARLL KREPKEEEQS RFYRASGAWI DWLIKHYGSA LQWVLKHQPL TLLVAVASLA
LTVFLYMVVP KGFFPVQDTG VIQGISEAPQ STSFAAMSER QQALSKVILQ DPAVQSLSSY
IGVDGDNATL NSGRLLINLK PHGERDVTAS QVISRLQPQV DRLVGIRLFM QPVQDLSIED
RVSRTQYQFS LSSPDADLLA QWSGKLVQAL QQRPELADVA SDLQDKGLQV YLVIDRDMAS
RLGITVSQIT NALYDAFGQR QISTIYTQAS QYRVVLQSQD AAVIGPQALE SIHVKATDGG
QVRLSALARI EQRQAQLAIS HIGQFPAVIL SFNLGHGASL GEAVQVIEQV QKDIGMPLGV
QTRFQGAAEA FQASLSSTLL LILAAVVTMY IVLGVLYESY IHPVTILSTL PSAAVGALLA
LLISGNDLGM IAIIGIILLI GIVKKNAIMM IDFALEAERH QGMSPRDAIY QAALLRFRPI
LMTTLAALFG AVPLMLATGS GAELRQPLGL VMVGGLLVSQ VLTLFTTPVI YLYFDRLARR
WRPATDVKQA EA
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