| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2328 |
|---|
| Symbol | |
|---|
| ID | 5870117 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 2595301 |
|---|
| End bp | 2595801 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641547453 |
|---|
| Product | redoxin domain-containing protein |
|---|
| Protein accession | YP_001668565 |
|---|
| Protein GI | 167033334 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2077] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCAAG TGACTCTCAA AGGCAACCCG GTTCAGGTCA AAGGCGAACT GCCGAAAGTC
GGCGCCCAGG CTCCGGCCTT CTCCCTGGTC GGTGAAGGCC TGGCTGACAA GTCGCTGAAG
GACTACGCCG GCAAGCGCAA GGTGCTGAAC ATCTTCCCGA GCGTCGACAC CCCAACCTGC
GCCACCTCCG TGCGCAAGTT CAACGCCCAG GCCAATGATG TAGCCAACAC CGTGGTACTG
TGCATTTCCG CCGACCTGCC GTTCGCCCAG GCCCGCTTCT GCGGCGCAGA AGGCCTGGAA
AACGTGAAGA ACCTGTCGAC CCTGCGTGGC CGCGAGTTCC TCGAGAACTA CGGCGTCGCC
ATCGCCGACG GCCCACTGGC CGGCCTGGCC GCCCGCGCCG TGGTGGTGCT GGACGAGAGC
GACAAGGTGC TGCACAGCGA GCTGGTTGGT GAAATTGCCG ACGAGCCGAA CTACGATGCA
GCGCTGGCTG TACTGAAGTA A
|
|---|
| Protein sequence | MAQVTLKGNP VQVKGELPKV GAQAPAFSLV GEGLADKSLK DYAGKRKVLN IFPSVDTPTC
ATSVRKFNAQ ANDVANTVVL CISADLPFAQ ARFCGAEGLE NVKNLSTLRG REFLENYGVA
IADGPLAGLA ARAVVVLDES DKVLHSELVG EIADEPNYDA ALAVLK
|
|---|
| |