Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2326 |
Symbol | |
ID | 5870115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2592360 |
End bp | 2593556 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641547451 |
Product | aromatic amino acid aminotransferase |
Protein accession | YP_001668563 |
Protein GI | 167033332 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1448] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.88203 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTCAAAC ATGTCGATGC CTATGCCGGC GACCCGATCC TCTCGTTGAT GGAAACCTTC AAGGCCGACC CGCGCGCCGA CAAGGTCAAC CTGAGTATTG GCCTGTACTA CGATGAGGCC GGCGTGGTGC CGCAACTGGC GGCTGTGGAT GCGGTGGAAA AACGCATGGC CGGCCAGGAC CACGAAGCCT CCCTGTACCT GCCGATGGAA GGCCTGGCCA GCTACCGCCA GGCGATCCAG GCGCTGCTGT TCGGTGCTGA TCACCCCGCC GTGACGGGCG GTCGCGTGGC TACCGTGCAG ACCGTGGGCG GCTCCGGTGC CCTTAAAGTT GGTGCCGACT TCCTCAAGCG CTACTTCCCG CAGTCCGAAG TCTGGGTCAG CAACCCGACC TGGGACAACC ACCGCGCCAT CTTCGAAGGC GCAGGCTTCA AGGTGCACTC CTACCCGTAC TTCGACCAGG CCACCCGTGG CGTGGACTTC GACGGCATGC TGGCCACCCT GCAGACCCTG CCGGCCAACA GCGTGGTCCT GCTGCACCCG TGCTGCCACA ACCCTACCGG CGCCGACCTG GAACAGCACC AGTGGCAGCA AGTGGTCGAA GTGGTCAAGG CGCGCCAGCT GATCCCGTTC CTCGACATCG CCTACCAAGG CTTCGCCGAA GGCCTGGTGG AAGACGCCTA CGCCATCCGC GAAATGGCCC GTGCCGGCGT GCCGTGCCTG GTCAGCAACT CGTTCTCGAA AATCTTCTCG CTGTACGGCG AGCGGGTAGG CGGCCTGTCG GTGGTGTGCG ATGACGACGC CACTGCCCAG AGCGTACTTG GCCAGTTGAA GGCCACCGTG CGCCGCAACT ACTCCAGCCC GCCCAACTTC GGCGCCCAGC TGGTGGCTGG CGTGCTCAGC GATGCAGGCC TGAATGCCCA GTGGGCCGAA GAAGTCGAAG TGATGCGCAA GCGGATCCTC GACATGCGCC AGGCGCTGGT CGATGCCCTG GCCGTGCTGC TGCCAGGCCA GGACTTCCAG TTCTTCCTGC GCCAGCGCGG CATGTTCAGC TACACCGGCT TCAGCGTCGA GCAGGTGCGT CGCCTGCGTG ACGAGTTCGG TGTGTACCTG ATCGACAGCG GCCGCGTGTG CATGTCCGGC CTGCGCCCGG CCAACCTGCA GCGGGTTGCC GAAGCGTTCG CCGCCGTTCA GAAGTAA
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Protein sequence | MFKHVDAYAG DPILSLMETF KADPRADKVN LSIGLYYDEA GVVPQLAAVD AVEKRMAGQD HEASLYLPME GLASYRQAIQ ALLFGADHPA VTGGRVATVQ TVGGSGALKV GADFLKRYFP QSEVWVSNPT WDNHRAIFEG AGFKVHSYPY FDQATRGVDF DGMLATLQTL PANSVVLLHP CCHNPTGADL EQHQWQQVVE VVKARQLIPF LDIAYQGFAE GLVEDAYAIR EMARAGVPCL VSNSFSKIFS LYGERVGGLS VVCDDDATAQ SVLGQLKATV RRNYSSPPNF GAQLVAGVLS DAGLNAQWAE EVEVMRKRIL DMRQALVDAL AVLLPGQDFQ FFLRQRGMFS YTGFSVEQVR RLRDEFGVYL IDSGRVCMSG LRPANLQRVA EAFAAVQK
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