| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2323 |
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| Symbol | |
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| ID | 5870112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2589416 |
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| End bp | 2590168 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641547448 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001668560 |
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| Protein GI | 167033329 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGT CCATGGCCTT GGTGGGTGCG TGCGCCCTGC TGCTGGCGGG TGCCGCCAGT
GCCGAAACCC TGCGTTTCGC CACGGAGGGT GCCTACCCGC CCTTCAACTA TGTAGACGCC
GATAACAAGC TGCATGGCTT CGATATCGAC ATCACCCATG CCCTGTGCGA ACAGATGAAA
GTGGAATGCA CGCTGGTGGC CCAGGACTGG GAAGGCATCA TCCCCGCCCT GATGGCACGC
AAGTACGACG CAGTGGTGGC GTCAATGATC GACACCGAAG AGCGGCGCAA GAAAATCGCG
TTCACCGACC ACTACTACCG CACGCCACTG ACCGTTGCGG TGGCCAAGGA CAGCAAGATC
GACAGCGCCC AGACCGACTT TGTCGGCTAC ACCGTCGGCG CCCAGTCGTC CTCCACCCAG
GCCATCTACG CCGAAGACGT GTATGGCAAG GCCGGTGCCG ATGTGAAGCT GTACCCAACC
ATGGACGAGG CCAACGCGGA CCTTGCCGCA GGCCGCCTGG ACGGCGTGAT TGCCGACAAA
TTCCCGCTGC ACGAGTGGAT GAGCAAGAAC GGCGGGGACT GCTGCAAGAT CCTCGGCGAT
GTGGCCGACA CCAAGGCCGA TGCCGCCATT GCCGTGCGCA AGGACGACGA AGCCCTGCGC
CAGCGCCTGA ACACCGCGCT ACAACAGATC GTGGCCAACG GCACCTACCA GAAGATCGCC
AGCAAGTACT TTGCTTTCGA TATCTACAAC TGA
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| Protein sequence | MNKSMALVGA CALLLAGAAS AETLRFATEG AYPPFNYVDA DNKLHGFDID ITHALCEQMK
VECTLVAQDW EGIIPALMAR KYDAVVASMI DTEERRKKIA FTDHYYRTPL TVAVAKDSKI
DSAQTDFVGY TVGAQSSSTQ AIYAEDVYGK AGADVKLYPT MDEANADLAA GRLDGVIADK
FPLHEWMSKN GGDCCKILGD VADTKADAAI AVRKDDEALR QRLNTALQQI VANGTYQKIA
SKYFAFDIYN
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