| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2320 |
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| Symbol | |
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| ID | 5870109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2586555 |
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| End bp | 2587799 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641547445 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001668557 |
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| Protein GI | 167033326 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.63288 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTGCC AGACCCTTGT CCTCGGCGCC GGTATCGTCG GCGTCAGCAC CGCCCTGCAC
CTGCAGGCCC GCGGGCGCCA GGTGATTCTG ATCGACCGCG ACGAACCGGG CAGCGGCACC
AGCCACGGCA ACGCCGGGCT GATCGAGCGC TCCAGCGTCA TCCCCTACGC CTTCCCCCGG
CAACTGGGCG CGCTGCTGCG CTATGGCCTG AACCGCCAGC CCGATGTGCG CTACAGCCTG
GCGCACCTGC CCAAGGTCGC ACCGTGGCTG TGGCGCTACT GGCGCCAGTC GGCGCCCGGC
CGCCTGGCCG GGGCCGCCGC CGATATGCTG CCGCTGGTAC AACGCTGCGT CGAAGAACAC
GACGCGCTGA TCGAAGCGGC CGGCCTTGAA GGGCTGGTGC AGGCCAAAGG CTGGATCGAA
GTGTTCCGCG ACCCTGCGCT GTTCGAGCAG GCCAAAACTG ACGCCAAGGG CCTGAGCCGC
TACGGCTTGC AGTTCGAGAT ACTCGAATGC GGGCAACTGC AGGCACGCGA GCACCAGTTG
GACGCCACCG TGGTCGGTGG CATTCATTGG CTCGACCCAA AGACCGTGAA CAACCCCGGC
GCCCTCACCC GTGGCTATGC CGCGCTGTTC CTGCAGCGCG GCGGGCAGTT CCTGCATGGC
GATGCGCGCA GCCTGCGCCA AGCCAACGGC CAGTGGCGGG TAGAAAGCCG TCGTGGCCCG
GTTACCGCCG ACGAGGTGGT GGCCTGCCTC GGCCCGCAGT CGGCGGACCT GTTCAGCGGC
CTGGGCTATC AGATTCCGCT GGCGATCAAA CGTGGCTACC ACATGCACTA CAGCACCCGC
GACGGCGCAC AGTTGGAGCA CTCGATCTGC GATACCCAGG GCGGCTACGT GCTGGCGCCG
ATGGCGCGCG GTGTACGCCT GACCACCGGC ATCGAGTTCG ACGCAGCCGG GGCGCCTGGC
AACCAGATCC AGCTGGGCCG TTGCGAAGCC TTGGCGCGCA AGCTGTTCCC GGCCCTCGGC
GAGCGGCTGG ACGACACCCC ATGGCTGGGC CGTCGCCCTT GCCTGCCCGA CATGCGCCCG
GTGATCGGCC CGGCACCGCG CCACCCGGGG CTGTGGTTCA ACTTTGGCCA CGCCCACCAC
GGCCTCACCC TGGGCCCGGT CAGCGGCCGG CTATTGGCCG AACTGCTCAC TGGCGAGCGC
CCCTTCACCG ACCCCGCGCC CTACAGCGCG ACCCGTTTCG ACTGA
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| Protein sequence | MHCQTLVLGA GIVGVSTALH LQARGRQVIL IDRDEPGSGT SHGNAGLIER SSVIPYAFPR
QLGALLRYGL NRQPDVRYSL AHLPKVAPWL WRYWRQSAPG RLAGAAADML PLVQRCVEEH
DALIEAAGLE GLVQAKGWIE VFRDPALFEQ AKTDAKGLSR YGLQFEILEC GQLQAREHQL
DATVVGGIHW LDPKTVNNPG ALTRGYAALF LQRGGQFLHG DARSLRQANG QWRVESRRGP
VTADEVVACL GPQSADLFSG LGYQIPLAIK RGYHMHYSTR DGAQLEHSIC DTQGGYVLAP
MARGVRLTTG IEFDAAGAPG NQIQLGRCEA LARKLFPALG ERLDDTPWLG RRPCLPDMRP
VIGPAPRHPG LWFNFGHAHH GLTLGPVSGR LLAELLTGER PFTDPAPYSA TRFD
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