| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2317 |
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| Symbol | |
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| ID | 5870106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2583232 |
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| End bp | 2584143 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641547442 |
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| Product | 5-dehydro-4-deoxyglucarate dehydratase |
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| Protein accession | YP_001668554 |
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| Protein GI | 167033323 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR03249] 5-dehydro-4-deoxyglucarate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.612252 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCAC AAGAACTTAA ATCCATCCTC TCCCACGGCC TGCTGTCTTT CCCGGTCACC
GACTTCAACG CCCAGGGCGA CTTCAACCCG GCTGGCTACA TCAAGCGCCT GGAGTGGCTG
GCCCCGTATG GCGCCAGCGC CCTGTTCGCC GCTGGCGGCA CCGGTGAGTT CTTCTCCTTG
GCCGCCAGCG AGTACAGCCA GGTGATCAAG ACCGCCGTCG ATACCTGCGC CACCTCGGTT
CCTATCCTCG CGGGTGTTGG TGGGTCCACC CGTCAGGCCA TCGAATACGC ACAAGAAGCC
GAGCGCCTGG GTGCCAAGGG CCTGTTGCTG CTGCCGCATT ACCTGACCGA AGCCAGCCAG
GACGGCGTAG CCGCACACGT AGAAGCGGTG TGCAAATCGG TGAACATCGG CGTGGTGGTG
TACAACCGCA ACGTCTGCCG CCTGAACGCC GACCTGCTGG AAAAACTGGC CGAGCGCTGC
CCGAACCTGA TCGGCTACAA GGATGGCCTG GGTGATATCG AGCTGATGGT GTCGATCCGT
CGCCGCCTGG GCGAACGTTT CAGCTACCTG GGTGGCCTGC CGACCGCCGA AGTGTATGCT
GCTGCCTACA AGGCCCTGGG CGTGCCGGTG TACTCCTCCG CGGTGTTCAA CTTCGTGCCG
AAGACCGCCA TGGACTTCTA CAGCGCCATC GCCCGTGACG ACCACGCTGC CGTGGCCAAG
CTGATCGACG ATTTCTTCCT GCCGTACCTG GACATTCGCA ACCGCAAAGC CGGCTACGCC
GTGAGCATCG TCAAGGCCGG CGCCAAAATT GCCGGTTACG ACGCAGGCCC CGTGCGCACC
CCACTGACCG ACCTCACCGC AGAAGAGTAC GAGATGCTCG CCGCGCTGAT GGACAAGATG
GGCCCGCAGT AA
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| Protein sequence | MNPQELKSIL SHGLLSFPVT DFNAQGDFNP AGYIKRLEWL APYGASALFA AGGTGEFFSL
AASEYSQVIK TAVDTCATSV PILAGVGGST RQAIEYAQEA ERLGAKGLLL LPHYLTEASQ
DGVAAHVEAV CKSVNIGVVV YNRNVCRLNA DLLEKLAERC PNLIGYKDGL GDIELMVSIR
RRLGERFSYL GGLPTAEVYA AAYKALGVPV YSSAVFNFVP KTAMDFYSAI ARDDHAAVAK
LIDDFFLPYL DIRNRKAGYA VSIVKAGAKI AGYDAGPVRT PLTDLTAEEY EMLAALMDKM
GPQ
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