| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2315 |
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| Symbol | |
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| ID | 5870104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2580131 |
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| End bp | 2581684 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641547440 |
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| Product | galactarate dehydratase |
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| Protein accession | YP_001668552 |
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| Protein GI | 167033321 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2721] Altronate dehydratase |
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| TIGRFAM ID | [TIGR03248] galactarate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.761535 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTTGA TCGAACATTC CGACTCGCCG CGCTACGTCC GCCTGCACGA CGACGATAAC
GTCGTGGTGG TGGTCAACGA CGGCGGCCTG GGCGAAGGCG CCCACTTCGC CGACGGCCTG
ACCTTGGTCG AAGGCGTGCC ACAAAGCCAC AAGGTCGCAA CCAAGGCCAT CGCCAAAGGC
GAGCCCGTGC GCCGCTACGG GCAAATCATC GGCTACGCGC TGGAAGACCT ACGCCAGGGC
AGTTGGGTGC AGGAAAGCCA ACTGGCCATG CCGGCCGCCC CGGAACTGGA CAGCTTGCCG
CGCTGCGACG CCGTCCCACA ACCGCTGCCG CCACTCGAAG GCTTCACGTT CGAAGGCTAC
CGCAATGCCG ACGGCACCGT TGGCACCCGC AACATCCTCG GCATCACCAC CACCGTGCAG
TGTGTGACCG GCGTGCTGGA GCATGCGGTC AAGCGCATTC GCAGCGAACT GCTGCCCAAG
TACCCCAACG TCGATGACGT GGTAGCCATC ACCCACAGCT ACGGCTGCGG CGTGGCCATC
AACGCTCGCG ACGCCTACAT CCCGATCCGC ACCGTGCGCA ACCTGGCCCG CAACCCCAAC
CTGGGTGGCG AGGCATTGGT CATCAGCCTC GGCTGCGAAA AGCTGCAGGC CGGCCAGGTG
ATGCACGACA ACGACCCGTC GGTAGACCTC AGCGAGCCAT GGTTGTACCG CCTGCAGGAC
GCCAGCCTGG GCTTTGTGGA AATGATCGAG CAAATCATGG AGCTGGCCGA AACCCGCCTC
AAGAAGCTCG ACCAGCGCCG CCGCGAAACC GTACCGGCCA GCGAGTTGAT CCTCGGCATG
CAGTGCGGTG GCAGCGATGC CTTCTCGGGC ATCACCGCCA ACCCTGCGCT GGGCTACGCC
GCAGACTTGC TGGTACGTGC CGGTGCTACG GTGCTGTTCT CGGAAGTGAC CGAGGTACGA
GACGCCATCT ACATGCTGAC CTCGCGCGCG CAAAACCAAG ACGTTGCCGA TGCCCTGGTG
CGCGAAATGG ACTGGTACGA CCGCTACCTG CAGCAAGGGG CCGCCGACCG CAGTGCCAAC
ACGACGCCGG GCAACAAGAA AGGTGGCCTG TCCAATATCG TCGAGAAATC CCTGGGGTCG
ATCGTCAAGT CGGGCAGCGG CGCTATCCAG GGCGTGCTTG GCCCAGGCGA GCGGGTAACG
CGCAAGGGCC TGATCTTCTG CGCCACCCCG GCCAGCGACT TCGTCTGCGG CACTTTGCAA
CTGGCCGCCG GCATGAACCT GCATGTGTTC ACCACAGGCC GAGGCACCCC TTACGGGCTG
GCCATGGCAC CCGTGGTCAA GGTGTGCACG CGCACCGAAC TGGCCCAGCG TTGGCCCGAC
CTGATCGATA TCGACGCCGG GCGCATCGCC ACAGGCCGTT CGACCATCGA AGAGCTGGGC
TGGGAACTGT TCCACTACTA CCTGGACGTG GCCAGCGGCC GCAAGCAGAC CTGGGCCGAG
CAGCACCGGC TACACAACGA CATCACCCTG TTCAACCCGG CACCGATTAC CTGA
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| Protein sequence | MQLIEHSDSP RYVRLHDDDN VVVVVNDGGL GEGAHFADGL TLVEGVPQSH KVATKAIAKG
EPVRRYGQII GYALEDLRQG SWVQESQLAM PAAPELDSLP RCDAVPQPLP PLEGFTFEGY
RNADGTVGTR NILGITTTVQ CVTGVLEHAV KRIRSELLPK YPNVDDVVAI THSYGCGVAI
NARDAYIPIR TVRNLARNPN LGGEALVISL GCEKLQAGQV MHDNDPSVDL SEPWLYRLQD
ASLGFVEMIE QIMELAETRL KKLDQRRRET VPASELILGM QCGGSDAFSG ITANPALGYA
ADLLVRAGAT VLFSEVTEVR DAIYMLTSRA QNQDVADALV REMDWYDRYL QQGAADRSAN
TTPGNKKGGL SNIVEKSLGS IVKSGSGAIQ GVLGPGERVT RKGLIFCATP ASDFVCGTLQ
LAAGMNLHVF TTGRGTPYGL AMAPVVKVCT RTELAQRWPD LIDIDAGRIA TGRSTIEELG
WELFHYYLDV ASGRKQTWAE QHRLHNDITL FNPAPIT
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