Gene PputGB1_2303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2303 
Symbol 
ID5870092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2567564 
End bp2569696 
Gene Length2133 bp 
Protein Length710 aa 
Translation table11 
GC content63% 
IMG OID641547428 
ProductTonB-dependent siderophore receptor 
Protein accessionYP_001668540 
Protein GI167033309 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4774] Outer membrane receptor for monomeric catechols 
TIGRFAM ID[TIGR01783] TonB-dependent siderophore receptor
[TIGR03304] outer membrane insertion C-terminal signal 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.470584 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.447365 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAA GGTCTGTTGC CCCAGCATCC ATTTCCATGC TGGGCCTGCT GGTTGTGCCT 
GCTGTTCACG CTGCCGTTCA AACCCAAGCG CAGGGTAGCC TCGCCCTGCC CGCCACTGCC
GTCACCAGCG CCTACGAGCA GCAAAGCTAC AAGGCCAGTG AAAGCCGCAG CGCCATGAAG
ATCGACGCGC CGCTGCGTGA TATCCCGCAA ACCGTCAACG TCGTGCCCGA AAGCGTAATC
AAGGATCAGG GCGCGCAGTC CATGGAGGAC GTGCTGAAGA ACGTGCCCGG CATCGGCCTG
TCCAACGGCG ACGGCCAGCG CGACCAGGTG ACCATCCGCG GCTTCAGCGC CATTGGCGAC
ATGTACATCG ACGGCGTGCG CGACGATGCC CTGTACTTCC GTGACCTGTC CAACGTCGAG
CGTGTCGAGG TGATCAAGGG CCCAGCCGCC GTGCTGTATG GCCGTGGCTC TTCGGGCGGG
CTGATCAACA GCATCAGCAA GAAGCCAAGC TTCACGCCCA AGCGCGAAGT GGGCATGAGC
TTCGACAGCG AAGGCAAACG CCGCACGCAG TTCGACACCG GTTGGGCCGA CCCGCAAAGC
AACCAGGCCT ACCGCGTGAC CGGCGCCTTC GAAGACAGCG ACACCTTCCG CGACGATGGC
TATATCGACC GCAAGGCCAT CGCGCCGTCG GCCTACTTCC GCCTCTCGGA CGACCTGGAA
CTGAACCTGG GCGCCACCTA CCTGTACGAC AAGCGCCTGA TCGACTTCGG CATCCCGGCC
CTGGGCAACC GCCCGGTGGA TGTCGATCGC GACAAGCGCT TCGGCTCTGG CGATGCCGAC
CAGGACTACG CCCGCAGCGA GGTGTTCTCG CTGACCGCCA GCCTGGACTA CCGCATCAAC
GACAGCTTCA CGCTGACCAA CACCAGCCGT TACTACCGCT ACGACCTGGA CCGCAACAAC
ACCCTGGCCG ACAGCAGCCC GACACGCTTC GTCACTGCGC CCAACGGCGA ACTGCTGGTC
AAGCTCAACC GTGGCAACGT TGCCCGTGAC GAGTACGGTG TATTCAACCA GACCGAACTC
AAGCAGCAGG CGCAAGTGGC CGGCATGCAG CACAACCTGC TGTATGGCGT GGAAGTGGGC
TTGCAGGACA AGTACCAGCG CGTGCTGAGC CAAAACAATG TGGCCCAGGT GCCGGTGTAC
CGCGACGCCC TGGTGCCGGT GCCAGACCAT GCCGCCAACC TGTCGTCCAA AGGCACCAAC
TTCCAGCAGA CCACCGGTTT GTACCTGCAG GACATGATCG AGCTTAACGA GCACTGGAAG
GCCCTGGTGG GTGTGCGTTA TGACATCTTC GGCCAGGAGT ACGACGACGA CCGCGTGCAG
AACGTCGACC TCGACCGCAC CGACAAGACC TGGAGCCCGC GCGCCGGCCT GGTCTATCAG
CCGGACACCA TCCAGTCCTA CTACGTGTCG GTCAGCCGCA GCTACCAGCC TTCGGGCGAA
GTGTTCGCGG TCAGCCCGAC CAACCAGCAT CTGGAGCCAG AAGAAACCAC CAACTATGAA
ATCGGCGCCA AATGGGACCT GCTCGACAGC CGCCTGTCGC TGACCGCTGC GGTGTTCCGC
CTTGAGCGCA CCAACATGAA GACTGCCGAC CCGGCCAACC CCAACCTGAC CGTACTGGCG
GGCGAGCAAC GTACCGATGG TTTCGAAGCC ACCGTCAGCG GGCAGCTCTC GGACAAGTGG
CAAGTCTACG CCGGTTACGC CTACCTGGAT GCCGAGATCA CCAAGTCGAA CAGCAAGACC
AATGGCGTGG CCAATGAAGG CCAGACCCCT ACGCTGACGC CGCGTAACAG CGCCAACATC
TGGCTGGTGC GCACCCTGAC CCCAGAGTGG CGCGTGGCTG CCGGTGCCAA CTACGTCGAC
GAGCGCTACA CCGCGCTCGA CAACGTAGTG GTGATGCCGG GCTACACCAC CTTCGACGCC
GCACTGCTGT ACAGCGTGCC GCAGTGGGAT GCCGCGCTGC GCCTGAAGAA CGCCTTCGAC
CGTGACTACT ATGCCTCGGC GCACGGCTCG GTGGACCTGG TTACGCCAGG GGCACCACGG
ACGCTGGAAG CCAGCTTCAA CTACCGCTTC TGA
 
Protein sequence
MAKRSVAPAS ISMLGLLVVP AVHAAVQTQA QGSLALPATA VTSAYEQQSY KASESRSAMK 
IDAPLRDIPQ TVNVVPESVI KDQGAQSMED VLKNVPGIGL SNGDGQRDQV TIRGFSAIGD
MYIDGVRDDA LYFRDLSNVE RVEVIKGPAA VLYGRGSSGG LINSISKKPS FTPKREVGMS
FDSEGKRRTQ FDTGWADPQS NQAYRVTGAF EDSDTFRDDG YIDRKAIAPS AYFRLSDDLE
LNLGATYLYD KRLIDFGIPA LGNRPVDVDR DKRFGSGDAD QDYARSEVFS LTASLDYRIN
DSFTLTNTSR YYRYDLDRNN TLADSSPTRF VTAPNGELLV KLNRGNVARD EYGVFNQTEL
KQQAQVAGMQ HNLLYGVEVG LQDKYQRVLS QNNVAQVPVY RDALVPVPDH AANLSSKGTN
FQQTTGLYLQ DMIELNEHWK ALVGVRYDIF GQEYDDDRVQ NVDLDRTDKT WSPRAGLVYQ
PDTIQSYYVS VSRSYQPSGE VFAVSPTNQH LEPEETTNYE IGAKWDLLDS RLSLTAAVFR
LERTNMKTAD PANPNLTVLA GEQRTDGFEA TVSGQLSDKW QVYAGYAYLD AEITKSNSKT
NGVANEGQTP TLTPRNSANI WLVRTLTPEW RVAAGANYVD ERYTALDNVV VMPGYTTFDA
ALLYSVPQWD AALRLKNAFD RDYYASAHGS VDLVTPGAPR TLEASFNYRF