| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2303 |
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| Symbol | |
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| ID | 5870092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2567564 |
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| End bp | 2569696 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641547428 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001668540 |
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| Protein GI | 167033309 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor
[TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.470584 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.447365 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAAA GGTCTGTTGC CCCAGCATCC ATTTCCATGC TGGGCCTGCT GGTTGTGCCT
GCTGTTCACG CTGCCGTTCA AACCCAAGCG CAGGGTAGCC TCGCCCTGCC CGCCACTGCC
GTCACCAGCG CCTACGAGCA GCAAAGCTAC AAGGCCAGTG AAAGCCGCAG CGCCATGAAG
ATCGACGCGC CGCTGCGTGA TATCCCGCAA ACCGTCAACG TCGTGCCCGA AAGCGTAATC
AAGGATCAGG GCGCGCAGTC CATGGAGGAC GTGCTGAAGA ACGTGCCCGG CATCGGCCTG
TCCAACGGCG ACGGCCAGCG CGACCAGGTG ACCATCCGCG GCTTCAGCGC CATTGGCGAC
ATGTACATCG ACGGCGTGCG CGACGATGCC CTGTACTTCC GTGACCTGTC CAACGTCGAG
CGTGTCGAGG TGATCAAGGG CCCAGCCGCC GTGCTGTATG GCCGTGGCTC TTCGGGCGGG
CTGATCAACA GCATCAGCAA GAAGCCAAGC TTCACGCCCA AGCGCGAAGT GGGCATGAGC
TTCGACAGCG AAGGCAAACG CCGCACGCAG TTCGACACCG GTTGGGCCGA CCCGCAAAGC
AACCAGGCCT ACCGCGTGAC CGGCGCCTTC GAAGACAGCG ACACCTTCCG CGACGATGGC
TATATCGACC GCAAGGCCAT CGCGCCGTCG GCCTACTTCC GCCTCTCGGA CGACCTGGAA
CTGAACCTGG GCGCCACCTA CCTGTACGAC AAGCGCCTGA TCGACTTCGG CATCCCGGCC
CTGGGCAACC GCCCGGTGGA TGTCGATCGC GACAAGCGCT TCGGCTCTGG CGATGCCGAC
CAGGACTACG CCCGCAGCGA GGTGTTCTCG CTGACCGCCA GCCTGGACTA CCGCATCAAC
GACAGCTTCA CGCTGACCAA CACCAGCCGT TACTACCGCT ACGACCTGGA CCGCAACAAC
ACCCTGGCCG ACAGCAGCCC GACACGCTTC GTCACTGCGC CCAACGGCGA ACTGCTGGTC
AAGCTCAACC GTGGCAACGT TGCCCGTGAC GAGTACGGTG TATTCAACCA GACCGAACTC
AAGCAGCAGG CGCAAGTGGC CGGCATGCAG CACAACCTGC TGTATGGCGT GGAAGTGGGC
TTGCAGGACA AGTACCAGCG CGTGCTGAGC CAAAACAATG TGGCCCAGGT GCCGGTGTAC
CGCGACGCCC TGGTGCCGGT GCCAGACCAT GCCGCCAACC TGTCGTCCAA AGGCACCAAC
TTCCAGCAGA CCACCGGTTT GTACCTGCAG GACATGATCG AGCTTAACGA GCACTGGAAG
GCCCTGGTGG GTGTGCGTTA TGACATCTTC GGCCAGGAGT ACGACGACGA CCGCGTGCAG
AACGTCGACC TCGACCGCAC CGACAAGACC TGGAGCCCGC GCGCCGGCCT GGTCTATCAG
CCGGACACCA TCCAGTCCTA CTACGTGTCG GTCAGCCGCA GCTACCAGCC TTCGGGCGAA
GTGTTCGCGG TCAGCCCGAC CAACCAGCAT CTGGAGCCAG AAGAAACCAC CAACTATGAA
ATCGGCGCCA AATGGGACCT GCTCGACAGC CGCCTGTCGC TGACCGCTGC GGTGTTCCGC
CTTGAGCGCA CCAACATGAA GACTGCCGAC CCGGCCAACC CCAACCTGAC CGTACTGGCG
GGCGAGCAAC GTACCGATGG TTTCGAAGCC ACCGTCAGCG GGCAGCTCTC GGACAAGTGG
CAAGTCTACG CCGGTTACGC CTACCTGGAT GCCGAGATCA CCAAGTCGAA CAGCAAGACC
AATGGCGTGG CCAATGAAGG CCAGACCCCT ACGCTGACGC CGCGTAACAG CGCCAACATC
TGGCTGGTGC GCACCCTGAC CCCAGAGTGG CGCGTGGCTG CCGGTGCCAA CTACGTCGAC
GAGCGCTACA CCGCGCTCGA CAACGTAGTG GTGATGCCGG GCTACACCAC CTTCGACGCC
GCACTGCTGT ACAGCGTGCC GCAGTGGGAT GCCGCGCTGC GCCTGAAGAA CGCCTTCGAC
CGTGACTACT ATGCCTCGGC GCACGGCTCG GTGGACCTGG TTACGCCAGG GGCACCACGG
ACGCTGGAAG CCAGCTTCAA CTACCGCTTC TGA
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| Protein sequence | MAKRSVAPAS ISMLGLLVVP AVHAAVQTQA QGSLALPATA VTSAYEQQSY KASESRSAMK
IDAPLRDIPQ TVNVVPESVI KDQGAQSMED VLKNVPGIGL SNGDGQRDQV TIRGFSAIGD
MYIDGVRDDA LYFRDLSNVE RVEVIKGPAA VLYGRGSSGG LINSISKKPS FTPKREVGMS
FDSEGKRRTQ FDTGWADPQS NQAYRVTGAF EDSDTFRDDG YIDRKAIAPS AYFRLSDDLE
LNLGATYLYD KRLIDFGIPA LGNRPVDVDR DKRFGSGDAD QDYARSEVFS LTASLDYRIN
DSFTLTNTSR YYRYDLDRNN TLADSSPTRF VTAPNGELLV KLNRGNVARD EYGVFNQTEL
KQQAQVAGMQ HNLLYGVEVG LQDKYQRVLS QNNVAQVPVY RDALVPVPDH AANLSSKGTN
FQQTTGLYLQ DMIELNEHWK ALVGVRYDIF GQEYDDDRVQ NVDLDRTDKT WSPRAGLVYQ
PDTIQSYYVS VSRSYQPSGE VFAVSPTNQH LEPEETTNYE IGAKWDLLDS RLSLTAAVFR
LERTNMKTAD PANPNLTVLA GEQRTDGFEA TVSGQLSDKW QVYAGYAYLD AEITKSNSKT
NGVANEGQTP TLTPRNSANI WLVRTLTPEW RVAAGANYVD ERYTALDNVV VMPGYTTFDA
ALLYSVPQWD AALRLKNAFD RDYYASAHGS VDLVTPGAPR TLEASFNYRF
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