| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2276 |
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| Symbol | |
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| ID | 5870065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2539106 |
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| End bp | 2540311 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641547401 |
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| Product | ABC transporter, periplasmic binding protein |
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| Protein accession | YP_001668513 |
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| Protein GI | 167033282 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.278656 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.376143 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCATGG ATGACTGCTG TTCCACTTCT TCGCGTCGTG ATTTTCTCAA ACTCGGAGCC
ATGCTTACCG CCGCCGGTGC GCTGCCGTTG CTGTCGAGCT TGCAGGCCCG CGCCGCCGCC
GAGCCGGACG CACCGGTGCG CATCGGCTAT CTGCCGATCA CCGACGCCAC GCCACTGCTG
GTGGCGCATA ACAACGGGCT GTTCGAGGCC GAAGGCATCA AGGCCGAGCG CCCGGTGCTG
CTGCGCAGTT GGGCGCAGGT GATCGAGGCG TTCATCTCGG GTCAGGTCAA CGTCATCCAC
CTGTTGTCGC CGATGACCGT ATGGGCGCGC TATGGCAGCA AAGTGCCGGC CAAAGTGGTG
GCCTGGAACC ATGTGGGCGG TTCGGGGCTG ACCGTGGCGC CCGATATCAC CGACATGAAA
CAGCTCGGTG GCAAGACCGT GGCGATTCCG TTCTGGTATT CGATCCACAA CGTGGTACTG
CAGCAGATGC TCAACGACAA TGGTCTGTCG CCGGTGTCGA AGCCGGCCAA TGCGCAGCTA
GCTGCCAACG AAGTCAACCT GCTGGTGCTG CCGCCGTCCG ACATGCCACC GGCGCTGGCC
AGCAAGCGCA TCGCCGGCTA CATCGTTGCC GAGCCGTTCA ATGCCCTGGC CGAAAACCTC
AAGGTTGGCC GCGTGCAGCG CTTTACCGGC GATGTGTGGC GCAATCACGC CTGCTGCGTG
GTGTTCATGC ACGAACATGA CCTGAACAAC CGTCCAGAGT GGTCGCAGAA GGTGGTCAAC
GCCATCGTCA AGGCCCAGCA CTGGACCCGC GACCACCGCG CCGAGGCCGC GGCCTTGCTG
TCCAAGGCCG GCCCCAACAA GTACACCCCG CACGAGCCTG CGGTGTTGGC CAAGGTTCTG
GCGCCTGCCG CCGAGGACCG TGCAGGCTAT ATTGCCAGTG GCGCCATTCG CCATCAGCAG
TGGGACGAAA AACGCATCGA CTTCCAGCCA TACCCGTTCC CGAGCTACAC CGAAGAGCTG
GTCAAGCGCC TGAAAACCAC CCTGATCGAA GGCGACAACG GCTTTCTGGC CGGGCTGGAC
CCGGCGCAGA CCGCCCGCGA CCTGGTCGAC GATCGCTTCG TGCGCAATGC CATCGCTGCA
GTCGGCGGCC CGTCGGTGTT CGGCATTGCC GACAACTTCG AGCGTAGCGA GGAGTTCGCG
GTCTGA
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| Protein sequence | MCMDDCCSTS SRRDFLKLGA MLTAAGALPL LSSLQARAAA EPDAPVRIGY LPITDATPLL
VAHNNGLFEA EGIKAERPVL LRSWAQVIEA FISGQVNVIH LLSPMTVWAR YGSKVPAKVV
AWNHVGGSGL TVAPDITDMK QLGGKTVAIP FWYSIHNVVL QQMLNDNGLS PVSKPANAQL
AANEVNLLVL PPSDMPPALA SKRIAGYIVA EPFNALAENL KVGRVQRFTG DVWRNHACCV
VFMHEHDLNN RPEWSQKVVN AIVKAQHWTR DHRAEAAALL SKAGPNKYTP HEPAVLAKVL
APAAEDRAGY IASGAIRHQQ WDEKRIDFQP YPFPSYTEEL VKRLKTTLIE GDNGFLAGLD
PAQTARDLVD DRFVRNAIAA VGGPSVFGIA DNFERSEEFA V
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