| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2262 |
|---|
| Symbol | |
|---|
| ID | 5870051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 2523277 |
|---|
| End bp | 2524758 |
|---|
| Gene Length | 1482 bp |
|---|
| Protein Length | 493 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641547387 |
|---|
| Product | aldehyde dehydrogenase |
|---|
| Protein accession | YP_001668499 |
|---|
| Protein GI | 167033268 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTCG TTCGTTTCCA GATGTGCATC GACGGCCAAT GGCGCGATGC CCAGAGCGGC
AAGACCTTCG ACAGCCTCAA CCCGGCCACC GCCCAGGCCT GGGCGCAACT GCCCGACGCC
GACGAAGCCG ATGTGGAGCT GGCCGTACAG GCCGCCCAGC GTGCCTTCGA CAGCAAAGAG
TGGCGCAGCA TCACCGCCAC CGCACGCGGC AAGCTGCTGC GTCGCCTGGG CGACCTGATT
GCCGAGAACA AGGAACACCT GGCCCAGCTG GAAAGCCGTG ACAACGGCAA GCTGATCCGC
GAAACCCGCG GCCAGGTTGG CTACCTGCCA GAGTTCTTCC ACTACACCGC AGGCCTGGCC
GACAAACTCG AAGGCGGCAC CTTGCCGCTG GACAAGCCCG ACCTGTTCGC CTACACCGTA
CACGAGCCTA TCGGCGTGGT GGCCGGGATC ATCCCCTGGA ACAGCCCGCT GTACCTCACC
GCGATCAAGC TGGCCCCGGC CCTGGCCGCC GGTAACACCA TCGTGCTCAA ACCGTCCGAG
CACGCCTCGG CGACCATCCT TGAGCTGGCC CGCCTGGCCC TCGAAGCCGG CTTCCCGGCC
GGCGTGGTCA ACGTGGTCAC CGGTTACGGT CCAACCACCG GCGCAGCGCT CACCCGCCAC
CCGCTGGTGC GCAAGATCGC CTTCACCGGC GGCGCTGCCA CCGCCCGCCA CGTGGTGCGC
AGCAGTGCCG AGAACTTCGC CAAGCTGTCG CTGGAGCTGG GCGGCAAGTC GCCGAACATC
ATCTTCGCCG ACGCCGACCT GGACAGTGCC ATCAACGGTG CCGTGGCCGG CATCTATGCA
GCCTCCGGGC AAAGCTGCGT GGCCGGTTCG CGCCTGCTGG TGCAGGACGA GATCTTCGAC
GAATTCGTCG AGCGCCTGAT TGCCCGCGCC AAGCGTATCC GCATCGGCAA CCCGCAGGAC
GACGCCAGCG AAATGGGCCC AATGGCCACC GCACAGCAAC TGGCCGTGGT CGAAGGCCTG
GTGGCTGCGG CCAAGGCCGA GGGTGCCAAG CTGCACCTGG GCGGCAAGCG TGCCGAGGTT
GAAGGTGACG GCTGGTTCTA CGAACCGACC CTGTTCGAGT GCGACAGCAA CTCGATGACC
ATCATGCAGG AGGAAGTCTT CGGCCCGGTC GCCGCGGTGA TCCGCTTCAA GACCGAGGAA
GAAGCCCTGG CCATCGCCAA CGACTCCCAG TTCGGCCTGG CTGCCGGCAT CTGGACCCGC
GACCTGGGCC GTGCCCACCG CCTGGCCCGT GACGTGCGCT CGGGGATCAT CTGGGTCAAC
ACCTACCGCG CCGTGTCGGC CATGGCGCCG ATCGGTGGCT TCAAAAACAG CGGCTACGGC
CGCGAGAGCG GCATCGATTC GGTGCTGGCC TATACCGAGC TGAAGACCGT GTGGATCAAC
CTGTCCACCG CACCGATGCC CGACCCGTTT GTGATGCGTT AG
|
|---|
| Protein sequence | MTLVRFQMCI DGQWRDAQSG KTFDSLNPAT AQAWAQLPDA DEADVELAVQ AAQRAFDSKE
WRSITATARG KLLRRLGDLI AENKEHLAQL ESRDNGKLIR ETRGQVGYLP EFFHYTAGLA
DKLEGGTLPL DKPDLFAYTV HEPIGVVAGI IPWNSPLYLT AIKLAPALAA GNTIVLKPSE
HASATILELA RLALEAGFPA GVVNVVTGYG PTTGAALTRH PLVRKIAFTG GAATARHVVR
SSAENFAKLS LELGGKSPNI IFADADLDSA INGAVAGIYA ASGQSCVAGS RLLVQDEIFD
EFVERLIARA KRIRIGNPQD DASEMGPMAT AQQLAVVEGL VAAAKAEGAK LHLGGKRAEV
EGDGWFYEPT LFECDSNSMT IMQEEVFGPV AAVIRFKTEE EALAIANDSQ FGLAAGIWTR
DLGRAHRLAR DVRSGIIWVN TYRAVSAMAP IGGFKNSGYG RESGIDSVLA YTELKTVWIN
LSTAPMPDPF VMR
|
|---|
| |