Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2259 |
Symbol | |
ID | 5870048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2521459 |
End bp | 2522211 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641547384 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001668496 |
Protein GI | 167033265 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGCC AGCCACTCGA CGACAGCTTC AAGGTCAACC GCAACCCCGT TACCCTGCGC GAAATCGTGC TCGACAAGCT GCGCGCCGCG ATCATGAACT TTCACCTGCT GCCAGGCGAC CGCCTGGTCG AGCGCGACCT CTGCGACCGC TTGGGCGTCA GCCGTACTTC GGTGCGTGAA GCCCTGCGCC ACCTGGAGTC CGAAGGCCTG GTGGAATTCG CCGACGCCAA AGGCCCGCGC GTGGCCATCA TTACCCTGGA AGACGCCCGC GACATCTACG AACTGCGCTG TGTGCTCGAA GGCCTGATCG TGCAGCTGTT CACCCTCAAC GCCAAGGCCA AGGACATCCG TGCTCTGGAG CGCGCGCTGG AGGTCAACCG CGAAGCACTG GAAGAAGGCG AGCTGCAACA GGTGCTGGAT TCGGTACAAG GCTTTTACGA TGTGCTGCTG GAAGGCTCCG GCAACCAGGT GGCGGCGCAG CAGCTGCGCC AGTTGCAGGC CCGCATCAGC TACCTGCGCG CCACCTCGGT GTCGCAGGAA AACCGCCGTG GTGCCAGCAA CCGCGAAATG GAAAAGATCG TCGAGGCGAT CAAGGGGGGC GACCCACTGG TGGCCCACCA GGCCTCGGTC GACCACGTCC GCGCCGCCGC CAAGGTGGCC CTGGACTACC TGCGCCAGAA GCAGGATGAC AACGCCAAGG TGCGCGACAT TGTCGAGCCC CTGGCCCTGA AGGAACCCCG CATAGGCCGC TGA
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Protein sequence | MKRQPLDDSF KVNRNPVTLR EIVLDKLRAA IMNFHLLPGD RLVERDLCDR LGVSRTSVRE ALRHLESEGL VEFADAKGPR VAIITLEDAR DIYELRCVLE GLIVQLFTLN AKAKDIRALE RALEVNREAL EEGELQQVLD SVQGFYDVLL EGSGNQVAAQ QLRQLQARIS YLRATSVSQE NRRGASNREM EKIVEAIKGG DPLVAHQASV DHVRAAAKVA LDYLRQKQDD NAKVRDIVEP LALKEPRIGR
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