Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2258 |
Symbol | |
ID | 5870047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2520893 |
End bp | 2521456 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641547383 |
Product | NUDIX hydrolase |
Protein accession | YP_001668495 |
Protein GI | 167033264 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAACG CCCCGCGCTA CTGCCCGCAC TGCACCACGG AACTGGCCCG GGGCGTTCCC ACAGGCGACA CCCATGAACG CCTGCACTGC ACCGGCTGCG GCTACATCCA TTACATCAAC CCGAAGATCA TCGCCGGCTG CATCATCGAG CGCGATGGCA AGTACCTGCT GTGTCAACGC GCCATCCCGC CGCGGCCGGG CACCTGGACT TTACCCGCCG GGTTCATGGA GGCTGGGGAA ACCACCGAGC AGGCGGCATT GCGCGAAGTG TGGGAAGAAA CCGGCGTTCG TGCGGACATC GTCTCACCCT ATTCGATCTT CAGCGTGCCG AAAATCAGCG AGGTGTACAT CATCTTCCGC GCCAGCGTCA CCGAAGAGAC CGGGCAGTAC GGGCCGGAGA CCCTGGCTTA CAAGTTCTTC GAACCGGATG AAATCCCCTG GGATCAAATC TACTACCCGG CGATCCGGCA GATTCTCGAG CGCTATATCC TCGAGCGCCA GGCCGGGGTG TATGGCATAT ACATGGGCAA TGACGACACC GGCAAGGTGC ACTTCATTCG CTGA
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Protein sequence | MPNAPRYCPH CTTELARGVP TGDTHERLHC TGCGYIHYIN PKIIAGCIIE RDGKYLLCQR AIPPRPGTWT LPAGFMEAGE TTEQAALREV WEETGVRADI VSPYSIFSVP KISEVYIIFR ASVTEETGQY GPETLAYKFF EPDEIPWDQI YYPAIRQILE RYILERQAGV YGIYMGNDDT GKVHFIR
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