Gene PputGB1_2258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2258 
Symbol 
ID5870047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2520893 
End bp2521456 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content61% 
IMG OID641547383 
ProductNUDIX hydrolase 
Protein accessionYP_001668495 
Protein GI167033264 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAACG CCCCGCGCTA CTGCCCGCAC TGCACCACGG AACTGGCCCG GGGCGTTCCC 
ACAGGCGACA CCCATGAACG CCTGCACTGC ACCGGCTGCG GCTACATCCA TTACATCAAC
CCGAAGATCA TCGCCGGCTG CATCATCGAG CGCGATGGCA AGTACCTGCT GTGTCAACGC
GCCATCCCGC CGCGGCCGGG CACCTGGACT TTACCCGCCG GGTTCATGGA GGCTGGGGAA
ACCACCGAGC AGGCGGCATT GCGCGAAGTG TGGGAAGAAA CCGGCGTTCG TGCGGACATC
GTCTCACCCT ATTCGATCTT CAGCGTGCCG AAAATCAGCG AGGTGTACAT CATCTTCCGC
GCCAGCGTCA CCGAAGAGAC CGGGCAGTAC GGGCCGGAGA CCCTGGCTTA CAAGTTCTTC
GAACCGGATG AAATCCCCTG GGATCAAATC TACTACCCGG CGATCCGGCA GATTCTCGAG
CGCTATATCC TCGAGCGCCA GGCCGGGGTG TATGGCATAT ACATGGGCAA TGACGACACC
GGCAAGGTGC ACTTCATTCG CTGA
 
Protein sequence
MPNAPRYCPH CTTELARGVP TGDTHERLHC TGCGYIHYIN PKIIAGCIIE RDGKYLLCQR 
AIPPRPGTWT LPAGFMEAGE TTEQAALREV WEETGVRADI VSPYSIFSVP KISEVYIIFR
ASVTEETGQY GPETLAYKFF EPDEIPWDQI YYPAIRQILE RYILERQAGV YGIYMGNDDT
GKVHFIR