Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2256 |
Symbol | |
ID | 5870045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2517353 |
End bp | 2519536 |
Gene Length | 2184 bp |
Protein Length | 727 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641547381 |
Product | GAF sensor hybrid histidine kinase |
Protein accession | YP_001668493 |
Protein GI | 167033262 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.903593 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAAAT GGTTAGACGG CGGCGGCTTG ATGGCCGAAC GCATCCGCAA CCACGACTGG ACACGTACCA GCCTCGGCCC GCTCGAGGCC TGGCCGGATG CACTCAAGAC CACCGTGGCG CTGTGCCTGG CCTCGCGCTT CCCACAGGCC GTGTTGTGGG GCCCCGACCT GCTTACCCTG CACAACGACG CCTTCTTGCC AATCCTCGGG CAGAAACCCT TGGCCCTGGG CGTCCCCTTC CGCGAGGTCT GGCAAGAAGC TTGGGCCGAC ATCAGCAGCA TGGCCGACCG TGCATTGGCC GGTGAAGCGG TGTACATCGA AGACTTCCCG TTGGCGATCG TGCGTAACGG CTGCCCCGAG CGTGCCTATT TCACCTTCTG CTACAGCCCG ATACGCGGCC ATGACGGCAA GGTGCTGGGC ATGCTCGACA CGGTCACCGA AACCACCGCC AGCGTGGTCA CCAACCAGCG CCTGAATTTT CTCGACAACC TTGGGCGCGC CGTGACCGAG GCCAACGACC CGGACCAGAT CATGGCCATC ACCACCCGCA TGCTGGTCGA GCACCTTGGC CTGTCCAGCT GTGCCTATGC GGTGATGGAG CCGGACCAGG ATGGCTTCAC TATCTGCGGC GACGCGGTGG CACCCGGTTC ACCACGCCTG GTGGGCCAGT ACCACCTGCA TGACTTCGGC CACATGGCGG TCAGCCGACT GCGCAGCGGC CTGGCTTTGG TGATCAACGA CAACCTCCGC GAGCTGGCGG CTGACGAGGC GGCAACCTTT CAGGCCATCG GCATTACGGC CACTATCTGC ATACCGCTGA TCAAGGGTGG CAGGTTGACG GCGCTGATGG CCATTCATGA CCGCGTGCCA AGGGTATGGA CCGACTACGA GCAAGCGCTG ATCGGCGAAG TGACCGAACG TTGCTGGGCG CATATCCAGC GGGTGCAGGC CAATGCCGAA GTGCGCGAGG CCATGGCAGC GCTGGAGGCG CTCAACGCCA CCCTGGAGCA CCGCGTCGAA GAACGTACTA CCCAGTTGCT GCACACCGAA GCCGTACTGC GCCAGGCACA AAAGCTGGAA GCCATCGGCC AGCTGACAGG TGGTGTCGCC CACGACTTCA ACAACCTGCT GACCATCATC CGGTCCTCGC TGCACTTTCT GCAGCGCCCC GACCTGGACG AGAAACGCCG CGAACGCTAC ATCAAGACCA TGTCCGACAC CGTGGACCGC GGCGCCAAGC TGACCGGCCA ACTGCTTGCC TTTGCCCGCC GCCAGGCCCT CAGCCCGCAA GTGTTCGAGG CCGGCCCTCG GTTGGAAGCC ATGGCCGAAA TGCTCGACAC CGCCACCGGC GCACGCATCC AGGTCGCACT GAAGCTGCCG CAGGCGCCCT GCCATATCCG CGCCGACCTC AGCCAGCTGG AAACGGCGGT GATCAACCTG ATGCTCAACG GACGCGACGC CATGGCCGGC GAAGGTACGT TGCTGCTGCG TCTGCAGGCC GACCAGAGCC TGCCTGCCCT GCGCGGCCAG GCGCCGCAGC CTGGCCCGTT TGCGGCCATC TCGGTGAGCG ACAGTGGTGT CGGTATTGCC AGCGAGCTGC TGGAGCGCAT TTTCGACCCG TTCTTCACCA CCAAGGCGCC GGGTGAAGGC ACCGGGCTGG GGTTGTCGCA GGTGTTCGGG TTTGCCAAGC AGTCTGGCGG TGACGTGCAG GTGCACAGCG TTCAGGGCCA GGGCACCACC TTTACCCTGT ACCTGCCACA GGAGACACCG CCCGCAGCCT TGCCGGCGGA TGCCCCAAGC AGCAGCCAGG CGCAGGCGCA GGGCGAACGA CGGCGAATAC TGGTGGTGGA GGACAACCCT GATCTTGGCA ACTTCACCGC TCAAATCCTA GAAGACCACG GCTATCGGAT CAGCTATGCG CGCTCGGCGG AAGAGGCCCT GACGCAGCTG GAGGGACCGG CAGGTGACTT TGATGCGGTG TTTTCCGATG TGGTCATGCC CGGCATGGGC GGCCTGGCGC TGGCCCGTGA GCTGCGCCGC CTGCACCCAC GGTTGCCGGT GATCCTCACG TCGGGTTACA GCGAGGCGAT TGCCGAAGGC GGGCACCAGG GGTTCACCTT CCTGGCCAAG CCCTATTCGG CAGAACAGGT GTGCCGCCTG CTCGGGAAAG TGCTGGGCAA CTGA
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Protein sequence | MAKWLDGGGL MAERIRNHDW TRTSLGPLEA WPDALKTTVA LCLASRFPQA VLWGPDLLTL HNDAFLPILG QKPLALGVPF REVWQEAWAD ISSMADRALA GEAVYIEDFP LAIVRNGCPE RAYFTFCYSP IRGHDGKVLG MLDTVTETTA SVVTNQRLNF LDNLGRAVTE ANDPDQIMAI TTRMLVEHLG LSSCAYAVME PDQDGFTICG DAVAPGSPRL VGQYHLHDFG HMAVSRLRSG LALVINDNLR ELAADEAATF QAIGITATIC IPLIKGGRLT ALMAIHDRVP RVWTDYEQAL IGEVTERCWA HIQRVQANAE VREAMAALEA LNATLEHRVE ERTTQLLHTE AVLRQAQKLE AIGQLTGGVA HDFNNLLTII RSSLHFLQRP DLDEKRRERY IKTMSDTVDR GAKLTGQLLA FARRQALSPQ VFEAGPRLEA MAEMLDTATG ARIQVALKLP QAPCHIRADL SQLETAVINL MLNGRDAMAG EGTLLLRLQA DQSLPALRGQ APQPGPFAAI SVSDSGVGIA SELLERIFDP FFTTKAPGEG TGLGLSQVFG FAKQSGGDVQ VHSVQGQGTT FTLYLPQETP PAALPADAPS SSQAQAQGER RRILVVEDNP DLGNFTAQIL EDHGYRISYA RSAEEALTQL EGPAGDFDAV FSDVVMPGMG GLALARELRR LHPRLPVILT SGYSEAIAEG GHQGFTFLAK PYSAEQVCRL LGKVLGN
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