Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2246 |
Symbol | |
ID | 5870035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2506962 |
End bp | 2507555 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641547371 |
Product | XRE family transcriptional regulator |
Protein accession | YP_001668483 |
Protein GI | 167033252 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGACCG AAACCCAACC GCGCCTTCGC CTGGAGCAAT ACCTGGGCCT GCAGATCAAG CGCCAGCGCC AGGCCCAGTC CCTCAAGCTC GCCGACGTGG CGCGCATCGC CGGCATCAGC CAGGGCATGC TGAGCAAGAT CGAGAATGCC CAGGTATCCA CCAGCCTTGA CACCCTAAGC CGCCTGTGCG ACGTGCTGGG TATGCCGATG GCCAAGCTGT TCAGCCAATA TGATCAGCCC GACGGCAATG CCCTGCTGGT AAAAGCCGGT GAAGGGCTGG AGGTGGTGCG CCGTGGCACC GAGAAGGGCC ACACCTACCA TTTGCTCAAT CACGCCAGAG GGCCGAAGAA GCACTTCGAG GCTTACATGG TGAGCATGGA CGACGCCAGC GAAGAGTTCC CGACCTTCGC CCACCCAGGC ACCGAGTTCC TCCATTTGCT GGAGGGCGAA CTGGTGTACC GCCACGGCAA CCAGCTCTAC CACATGCACG CTGGCGACAG CCTGACCTTC GACGGCGAAA CCCCGCACGG CCCGGAGCAA CTGGTGCAAG TGCCGATTCG CCTGCTGTCG ATCATGAACT ACGGCGACGA GTAG
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Protein sequence | MSTETQPRLR LEQYLGLQIK RQRQAQSLKL ADVARIAGIS QGMLSKIENA QVSTSLDTLS RLCDVLGMPM AKLFSQYDQP DGNALLVKAG EGLEVVRRGT EKGHTYHLLN HARGPKKHFE AYMVSMDDAS EEFPTFAHPG TEFLHLLEGE LVYRHGNQLY HMHAGDSLTF DGETPHGPEQ LVQVPIRLLS IMNYGDE
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