Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2234 |
Symbol | |
ID | 5870023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2493527 |
End bp | 2494534 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641547359 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001668471 |
Protein GI | 167033240 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.498713 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCCACC CCGCTTCTGC AAACCTCCCG CCGTCTATTG TAAAGAGTTG TTCCGTAAAG ACCTTCGGCT TTCTGATTTT GCCCAATTTC ACCACCATCG GCCTGGCGTC GGCGGTAGAA ACCTTGCGCA TGGCCAACTT GGCCGCGCGC AAGCCGCTGT TTCGCAGCGT GCTGATCGCG GCAGACGATA TGCCGGTAGT GGCCAGTAAC GGCATGCGCG TATTGCCCGA CTACAGCATC GCCAATGCCC CCGCACTGGA TGCCCTGCTG GTGGTCGGCG CCAACCCGAT CGACCGCAGC CGTGGCAACC GCCCGCTGAT CGACTGGTTG CGCCAACTGG CCCGCCAACG CTTGCCACTG GGCGGCATCT GCACCGGCAG CTACCTGTTG GCCAAGGCCG AATTGCTCAA GGGTTACCGC TGCACTATCC ACTGGGAAGA CCTGCCGACG TTGCAGGCCC ACTTCCCCGG TATCGTGATC TCCAGCCAGC TGTTCGAATT GGACCGCGAC CGTTATACCT GCTCGGGCGG CGTGGCGGCC ATGGACATGA TGCTGCAACT GGTTGCCCGC GAACCCGGTG GCCAGGACAT CGCGGCCAAG GCCGCTGAGC TGTTGCTGTG CGACCGCGTA CGCGGGGAGC GTGAGCGCCA GCGGGTACCG CTGCGCACCC TGCTGGGTAG CGCTCAGCCC AAGCTGAGCC AGGTGGTGGC GATCATGGAG GCCAACCTGG AGGAACCGTT GGGGCTGGAG GAGTTGGCCA GCCTCAACGA GATAACCGTG CGTCAGCTGG AGCGGCTGTT CCACAAGTAC CTGCAACGCA CGCCCAGCCA GTATTACCTG GAGCTGCGGC TGTCTCGGGC ACGGGAGTTG CTGCTGCGCA GTGACGTGCA GGTGCGCGAG GTGGCGCTGG CCTGCGGGTT CAGCTCGCCG GCGCATTTTT CCAAGAGTTA CAGCCGGTTC TTTGGTTTGT CGCCGTTGGG GGAGCGGCGG CAAGCTTCGT TGCATTGA
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Protein sequence | MVHPASANLP PSIVKSCSVK TFGFLILPNF TTIGLASAVE TLRMANLAAR KPLFRSVLIA ADDMPVVASN GMRVLPDYSI ANAPALDALL VVGANPIDRS RGNRPLIDWL RQLARQRLPL GGICTGSYLL AKAELLKGYR CTIHWEDLPT LQAHFPGIVI SSQLFELDRD RYTCSGGVAA MDMMLQLVAR EPGGQDIAAK AAELLLCDRV RGERERQRVP LRTLLGSAQP KLSQVVAIME ANLEEPLGLE ELASLNEITV RQLERLFHKY LQRTPSQYYL ELRLSRAREL LLRSDVQVRE VALACGFSSP AHFSKSYSRF FGLSPLGERR QASLH
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