Gene PputGB1_2234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2234 
Symbol 
ID5870023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2493527 
End bp2494534 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content63% 
IMG OID641547359 
ProductAraC family transcriptional regulator 
Protein accessionYP_001668471 
Protein GI167033240 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.498713 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCACC CCGCTTCTGC AAACCTCCCG CCGTCTATTG TAAAGAGTTG TTCCGTAAAG 
ACCTTCGGCT TTCTGATTTT GCCCAATTTC ACCACCATCG GCCTGGCGTC GGCGGTAGAA
ACCTTGCGCA TGGCCAACTT GGCCGCGCGC AAGCCGCTGT TTCGCAGCGT GCTGATCGCG
GCAGACGATA TGCCGGTAGT GGCCAGTAAC GGCATGCGCG TATTGCCCGA CTACAGCATC
GCCAATGCCC CCGCACTGGA TGCCCTGCTG GTGGTCGGCG CCAACCCGAT CGACCGCAGC
CGTGGCAACC GCCCGCTGAT CGACTGGTTG CGCCAACTGG CCCGCCAACG CTTGCCACTG
GGCGGCATCT GCACCGGCAG CTACCTGTTG GCCAAGGCCG AATTGCTCAA GGGTTACCGC
TGCACTATCC ACTGGGAAGA CCTGCCGACG TTGCAGGCCC ACTTCCCCGG TATCGTGATC
TCCAGCCAGC TGTTCGAATT GGACCGCGAC CGTTATACCT GCTCGGGCGG CGTGGCGGCC
ATGGACATGA TGCTGCAACT GGTTGCCCGC GAACCCGGTG GCCAGGACAT CGCGGCCAAG
GCCGCTGAGC TGTTGCTGTG CGACCGCGTA CGCGGGGAGC GTGAGCGCCA GCGGGTACCG
CTGCGCACCC TGCTGGGTAG CGCTCAGCCC AAGCTGAGCC AGGTGGTGGC GATCATGGAG
GCCAACCTGG AGGAACCGTT GGGGCTGGAG GAGTTGGCCA GCCTCAACGA GATAACCGTG
CGTCAGCTGG AGCGGCTGTT CCACAAGTAC CTGCAACGCA CGCCCAGCCA GTATTACCTG
GAGCTGCGGC TGTCTCGGGC ACGGGAGTTG CTGCTGCGCA GTGACGTGCA GGTGCGCGAG
GTGGCGCTGG CCTGCGGGTT CAGCTCGCCG GCGCATTTTT CCAAGAGTTA CAGCCGGTTC
TTTGGTTTGT CGCCGTTGGG GGAGCGGCGG CAAGCTTCGT TGCATTGA
 
Protein sequence
MVHPASANLP PSIVKSCSVK TFGFLILPNF TTIGLASAVE TLRMANLAAR KPLFRSVLIA 
ADDMPVVASN GMRVLPDYSI ANAPALDALL VVGANPIDRS RGNRPLIDWL RQLARQRLPL
GGICTGSYLL AKAELLKGYR CTIHWEDLPT LQAHFPGIVI SSQLFELDRD RYTCSGGVAA
MDMMLQLVAR EPGGQDIAAK AAELLLCDRV RGERERQRVP LRTLLGSAQP KLSQVVAIME
ANLEEPLGLE ELASLNEITV RQLERLFHKY LQRTPSQYYL ELRLSRAREL LLRSDVQVRE
VALACGFSSP AHFSKSYSRF FGLSPLGERR QASLH