Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2224 |
Symbol | |
ID | 5870013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2479318 |
End bp | 2480469 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641547349 |
Product | amine dehydrogenase |
Protein accession | YP_001668461 |
Protein GI | 167033230 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02658] methylamine dehydrogenase heavy chain |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.972392 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCGCG TCGACAGGCT CAGCATCTCG GCAGCCCTGG CCTTGGCCTT GGCGGCAGGC AGCAGTGCGG TGCGGGCCGA CCTGCCCGCC GAAGAGATCG GCCACAACAC CTTGCCGTTC CCGCCAGACC CTCACCGGGT CTACATCCTG GATGTGGACT TCAAGAACCC CATCGCCGGC AAGGTGGTGG TGGTGGACCC CAAGGCCAAG CGCATGCTCG GCATGACCAC CAACGCCTTC GTCGCCCCCA CCGCGCTGAG CCCGGACAAC CGCACGCTGT ATTCGGCCAA CCTGTTCTAC TCGCGCGGCA CCTACGGCGA ACGCACGGAT GTGCTGGTGG CCTGGGACAC CCAGACCCTG CAGCCGACCT GGGAGGTGGT GCTGCCTGCC AAGCGCGCCT CGACCCTGAC CGAGAAGTAC GCCATGGGTG TCAGCGCCGA CAACAAGCTG GCCTACGTCT TCAACCTGAC GCCGTCGACT TCGGTCACCG TGGTAGACAC CCAGGCGCGC AAGGTCGCCA GTGAAGTGCC CATCAGCGGC TGCGTGCTCA ATTACCCGGT AGGCAAGCGC AGCTTTGCGT CCCTGTGCGG TGACGGCCAA CTGCTGGTAG TAACCCTGGA TGACGCAGGC AAGGAAGTAT CACGCACGCA AACGCCATTC TTCGACCCGA ACAAGGTGCG CCTCAACGAA CGCGCCATCG CCAACGGCGA CACCTACTAC TTCACCACCA CTCAGGGTGA GGTGTACCCG GTGGCGTTCG AGGGCGGCAA GGCCAAGCCG CTGCCCACCT GGTCGCTGGT CAGCGACGAA GAGCGCAAGC AAGGCTGGGC ACCGGGCGGC TGGCAGGCCC TGGCCGTGGC ACCAGGCCTG AACCGCTTGT ATGCACTGAT GCACGACCAG CACACCGACG GCAAATGGGA AGACCCGAGC ACCACCATCT GGGCGTTCGA CCTCAAGACC GGCAAGAAGC TCGGCACTCT GGACTCGCCC AAACCCGTAT GGAGCCTGCA AGCCAGCCAC GACAAGGCAC CGATCCTGGT GGCCACCGAC CTGGAAGGCG GCGTGCAGTT CTTCGACCTC ACCAGCAACA AGCACAGCGG CGCGATGGAC CAGATCACCG ACACCCCTGT GCTCACCCTG GCCCCTTGGT AA
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Protein sequence | MRRVDRLSIS AALALALAAG SSAVRADLPA EEIGHNTLPF PPDPHRVYIL DVDFKNPIAG KVVVVDPKAK RMLGMTTNAF VAPTALSPDN RTLYSANLFY SRGTYGERTD VLVAWDTQTL QPTWEVVLPA KRASTLTEKY AMGVSADNKL AYVFNLTPST SVTVVDTQAR KVASEVPISG CVLNYPVGKR SFASLCGDGQ LLVVTLDDAG KEVSRTQTPF FDPNKVRLNE RAIANGDTYY FTTTQGEVYP VAFEGGKAKP LPTWSLVSDE ERKQGWAPGG WQALAVAPGL NRLYALMHDQ HTDGKWEDPS TTIWAFDLKT GKKLGTLDSP KPVWSLQASH DKAPILVATD LEGGVQFFDL TSNKHSGAMD QITDTPVLTL APW
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