Gene PputGB1_2224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2224 
Symbol 
ID5870013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2479318 
End bp2480469 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content65% 
IMG OID641547349 
Productamine dehydrogenase 
Protein accessionYP_001668461 
Protein GI167033230 
COG category 
COG ID 
TIGRFAM ID[TIGR02658] methylamine dehydrogenase heavy chain 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.972392 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGCG TCGACAGGCT CAGCATCTCG GCAGCCCTGG CCTTGGCCTT GGCGGCAGGC 
AGCAGTGCGG TGCGGGCCGA CCTGCCCGCC GAAGAGATCG GCCACAACAC CTTGCCGTTC
CCGCCAGACC CTCACCGGGT CTACATCCTG GATGTGGACT TCAAGAACCC CATCGCCGGC
AAGGTGGTGG TGGTGGACCC CAAGGCCAAG CGCATGCTCG GCATGACCAC CAACGCCTTC
GTCGCCCCCA CCGCGCTGAG CCCGGACAAC CGCACGCTGT ATTCGGCCAA CCTGTTCTAC
TCGCGCGGCA CCTACGGCGA ACGCACGGAT GTGCTGGTGG CCTGGGACAC CCAGACCCTG
CAGCCGACCT GGGAGGTGGT GCTGCCTGCC AAGCGCGCCT CGACCCTGAC CGAGAAGTAC
GCCATGGGTG TCAGCGCCGA CAACAAGCTG GCCTACGTCT TCAACCTGAC GCCGTCGACT
TCGGTCACCG TGGTAGACAC CCAGGCGCGC AAGGTCGCCA GTGAAGTGCC CATCAGCGGC
TGCGTGCTCA ATTACCCGGT AGGCAAGCGC AGCTTTGCGT CCCTGTGCGG TGACGGCCAA
CTGCTGGTAG TAACCCTGGA TGACGCAGGC AAGGAAGTAT CACGCACGCA AACGCCATTC
TTCGACCCGA ACAAGGTGCG CCTCAACGAA CGCGCCATCG CCAACGGCGA CACCTACTAC
TTCACCACCA CTCAGGGTGA GGTGTACCCG GTGGCGTTCG AGGGCGGCAA GGCCAAGCCG
CTGCCCACCT GGTCGCTGGT CAGCGACGAA GAGCGCAAGC AAGGCTGGGC ACCGGGCGGC
TGGCAGGCCC TGGCCGTGGC ACCAGGCCTG AACCGCTTGT ATGCACTGAT GCACGACCAG
CACACCGACG GCAAATGGGA AGACCCGAGC ACCACCATCT GGGCGTTCGA CCTCAAGACC
GGCAAGAAGC TCGGCACTCT GGACTCGCCC AAACCCGTAT GGAGCCTGCA AGCCAGCCAC
GACAAGGCAC CGATCCTGGT GGCCACCGAC CTGGAAGGCG GCGTGCAGTT CTTCGACCTC
ACCAGCAACA AGCACAGCGG CGCGATGGAC CAGATCACCG ACACCCCTGT GCTCACCCTG
GCCCCTTGGT AA
 
Protein sequence
MRRVDRLSIS AALALALAAG SSAVRADLPA EEIGHNTLPF PPDPHRVYIL DVDFKNPIAG 
KVVVVDPKAK RMLGMTTNAF VAPTALSPDN RTLYSANLFY SRGTYGERTD VLVAWDTQTL
QPTWEVVLPA KRASTLTEKY AMGVSADNKL AYVFNLTPST SVTVVDTQAR KVASEVPISG
CVLNYPVGKR SFASLCGDGQ LLVVTLDDAG KEVSRTQTPF FDPNKVRLNE RAIANGDTYY
FTTTQGEVYP VAFEGGKAKP LPTWSLVSDE ERKQGWAPGG WQALAVAPGL NRLYALMHDQ
HTDGKWEDPS TTIWAFDLKT GKKLGTLDSP KPVWSLQASH DKAPILVATD LEGGVQFFDL
TSNKHSGAMD QITDTPVLTL APW