Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2222 |
Symbol | |
ID | 5870011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2478120 |
End bp | 2478761 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641547347 |
Product | methylamine dehydrogenase accessory protein MauD |
Protein accession | YP_001668459 |
Protein GI | 167033228 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
TIGRFAM ID | [TIGR02661] methylamine dehydrogenase accessory protein MauD |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACTGC TTATCGCATC GAACATCCTG CTCTGGCTGC TGCTGATCGC AGTCGCCTTC ACCGTCATGG CCCTCGTGCG CCAGATTGGC GTGCTGCACG GGCGCATCGC CCCGGCCGGC GCGCTGATGG TGGACAAAGG CGTCACCGTG AACGACCCCG CGCCACAAGT GACTGCCGCC GACCGCCACG GCCGCCCGGT GAACATCGGC TACCGCGGCG AACGCTCGCA GTTGCTGTTC TTCCTCGCCC CCGGCTGCCC AGTGTGCAAA TCGCTGCTGC CGGCGGTGAA ATCGATTGCC AGGGACAACA GCGGTTCGCT GGACGTGATC TATGTCAGCG ACGGTGATTT CGCCGAGCAA CAGGCACTGA TCGAAGCCAA CGGCCTGCAG CAAGCCAGCT ACGTAGTCGG CCCGGAGGTG GGCATGACCT ACCAGATCGG CAAACTGCCC TATGCCGTAC TGATCGACGC AGCCGGCACC CTGCGCGCCA AAGGCCTGGT CAACTCGCGC GAACACCTGG ACAGCCTGTT CGAAACCCTG CACCTGGGCA GCGCCAGCCT GCAGCACTAC TTGCACGGCG ACCCGTCGCA CAGCCATGAC CACGAACACG CCCACACCCA CCAGCACAGC GCGCAGCACT GA
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Protein sequence | MQLLIASNIL LWLLLIAVAF TVMALVRQIG VLHGRIAPAG ALMVDKGVTV NDPAPQVTAA DRHGRPVNIG YRGERSQLLF FLAPGCPVCK SLLPAVKSIA RDNSGSLDVI YVSDGDFAEQ QALIEANGLQ QASYVVGPEV GMTYQIGKLP YAVLIDAAGT LRAKGLVNSR EHLDSLFETL HLGSASLQHY LHGDPSHSHD HEHAHTHQHS AQH
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