Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2214 |
Symbol | |
ID | 5870003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2471385 |
End bp | 2471864 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641547339 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001668451 |
Protein GI | 167033220 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.514813 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACTT CGAAGAACAC AGGCCACAGC CATCACGATC CGGCCAGCGA TGAGTTTCGC AAGGAAGACT TCCCTTTTTA CTGGCTGGCC CGTGTGCATG GCCGCTACAC CCAGAACATG GAACGGCTGC TGAAGAAGAT CGACCTTGAC GTGCCGCGCT GGCGCGTATT GTGGATCCTC AACGAGAACG GCGAATCGAG CATTTCCGAA ATCTCCACCC ATGCCATCGC CAAGCTGTCG ACCATCACCA AAATCGTCTA TCGGATGAAA GACGACGGCC TGGTCGACAC CGCCCCCAGC CCCGAGGACG GCCGCGTGAC CCAGGTACGC ATCACCGAGG CTGGGCTGCA GAGCATCGCG CGCATGCAGG ATGTGACCCG CGACCTGTTC CAGCGCAGCT TCAAGGGGCT GACCGAGGCG CAGGTGCAGC GGTTGAACAA GATGCTCGAA GTGGTTTTCC ATAACCTGGA TACCTTCTAG
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Protein sequence | MSTSKNTGHS HHDPASDEFR KEDFPFYWLA RVHGRYTQNM ERLLKKIDLD VPRWRVLWIL NENGESSISE ISTHAIAKLS TITKIVYRMK DDGLVDTAPS PEDGRVTQVR ITEAGLQSIA RMQDVTRDLF QRSFKGLTEA QVQRLNKMLE VVFHNLDTF
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