Gene PputGB1_2214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2214 
Symbol 
ID5870003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2471385 
End bp2471864 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content59% 
IMG OID641547339 
ProductMarR family transcriptional regulator 
Protein accessionYP_001668451 
Protein GI167033220 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.514813 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACTT CGAAGAACAC AGGCCACAGC CATCACGATC CGGCCAGCGA TGAGTTTCGC 
AAGGAAGACT TCCCTTTTTA CTGGCTGGCC CGTGTGCATG GCCGCTACAC CCAGAACATG
GAACGGCTGC TGAAGAAGAT CGACCTTGAC GTGCCGCGCT GGCGCGTATT GTGGATCCTC
AACGAGAACG GCGAATCGAG CATTTCCGAA ATCTCCACCC ATGCCATCGC CAAGCTGTCG
ACCATCACCA AAATCGTCTA TCGGATGAAA GACGACGGCC TGGTCGACAC CGCCCCCAGC
CCCGAGGACG GCCGCGTGAC CCAGGTACGC ATCACCGAGG CTGGGCTGCA GAGCATCGCG
CGCATGCAGG ATGTGACCCG CGACCTGTTC CAGCGCAGCT TCAAGGGGCT GACCGAGGCG
CAGGTGCAGC GGTTGAACAA GATGCTCGAA GTGGTTTTCC ATAACCTGGA TACCTTCTAG
 
Protein sequence
MSTSKNTGHS HHDPASDEFR KEDFPFYWLA RVHGRYTQNM ERLLKKIDLD VPRWRVLWIL 
NENGESSISE ISTHAIAKLS TITKIVYRMK DDGLVDTAPS PEDGRVTQVR ITEAGLQSIA
RMQDVTRDLF QRSFKGLTEA QVQRLNKMLE VVFHNLDTF