| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2206 |
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| Symbol | |
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| ID | 5869995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2464323 |
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| End bp | 2465258 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641547331 |
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| Product | catechol 1,2-dioxygenase |
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| Protein accession | YP_001668443 |
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| Protein GI | 167033212 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02439] catechol 1,2-dioxygenase, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.400147 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.251033 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTGA AAGTTTCCCA CACTGCCGAC ATTCAAGCCT TCTTCAAGCA GGTGGCTGGC
TTGGACCACG CCGAAGGCAA CCCGCGCTTC AAGCAGATCA TCCTGCGCGT GCTGCAAGAC
ACTGCACGCC TGGTCGAAGA CCTGGAGATC ACCGAAGACG AGTTCTGGCA CGCCGTTGAC
TATCTCAACC GCCTGGGCGG CCGTAACGAG GCGGGCCTGC TGGCTGCTGG CCTGGGCATC
GAGCACTTCC TCGACCTGCT GCAAGACGCC AAGGACGCCG AAGCCGGCCT TGCTGGCGGC
ACTCCGCGCA CCATCGAAGG CCCGCTGTAC GTCGCCGGGG CGCCGCTGGC GCAAGGCGAA
GTGCGCATGG ACGACGGCAC CGACCCAGGT GTGGTGATGT TCCTCCAGGG CCAGGTGTTC
GATGCCGACG GCAAGCCGTT GGCCGGTGCC ACCGTCGACC TGTGGCATGC CAACACCCAG
GGCACCTATT CGTACTTTGA CTCGACCCAG TCCGACTACA ACCTGCGCCG GCGCATCATC
ACCGATGCCG AGGGCCGCTA CCGTGCACGT TCGATCGTGC CGTCGGGGTA TGGTTGCGAT
CCGCAGGGGC CGACCCAGGA ATGCCTGGAC CTGCTCGGCC GTCATGGCCA GCGCCCGGCG
CATGTGCACT TCTTCATCTC GGCGCCGGGG TACCGCCACC TGACCACGCA GATCAACTTC
GAGGGTGACA AGTACCTGTG GGACGACTTT GCCTACGCCA CCCGTGACGG GCTGATTGGC
GAGCTGCGCT TTGTCGAAGA TGCGGCGGCG GCGCGTGACC GTGGCGTGCA AGGCGAGCGC
TTTGCCGAGC TTTCGTTCGA CTTCCACCTG CAGGGGGCCG CGGCGCCGGA GGCCGAGGCG
CGCAGCCACC GGCCGCGTGC GTTGCAGGAA GGCTGA
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| Protein sequence | MTVKVSHTAD IQAFFKQVAG LDHAEGNPRF KQIILRVLQD TARLVEDLEI TEDEFWHAVD
YLNRLGGRNE AGLLAAGLGI EHFLDLLQDA KDAEAGLAGG TPRTIEGPLY VAGAPLAQGE
VRMDDGTDPG VVMFLQGQVF DADGKPLAGA TVDLWHANTQ GTYSYFDSTQ SDYNLRRRII
TDAEGRYRAR SIVPSGYGCD PQGPTQECLD LLGRHGQRPA HVHFFISAPG YRHLTTQINF
EGDKYLWDDF AYATRDGLIG ELRFVEDAAA ARDRGVQGER FAELSFDFHL QGAAAPEAEA
RSHRPRALQE G
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