| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2198 |
|---|
| Symbol | |
|---|
| ID | 5869987 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 2454488 |
|---|
| End bp | 2454970 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641547323 |
|---|
| Product | AsnC family transcriptional regulator |
|---|
| Protein accession | YP_001668435 |
|---|
| Protein GI | 167033204 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAAG CTTTTGCTAT CGAAGAATTG GACGAGACCG ATCGCGAGCT GCTGCGCCTG
TTGCAGGCGG ACGGCACCCT TTCGAGCGCG GCACTGGGCG AACGCCTGTC GATGACCGTG
ACACCCTGCT GGCGTCGGCG CAAAAGGCTG GAAGAGCTGG GCATCATCAA GGATTACCAG
GCCAACCTCG ACCGCAGGAA ATTGGGGTAC GACGTGATGG CATTTGCCCA GGTGCGCTTT
GGCAACCACT CGGCCAATGC GCCGGACGAG TTCGAGCAGG TGATTCTGAA GCTGCCGCAG
GTGCTGTCCT GCCACAAGGT GACCGGTGAG GCCGACTATG TGCTGACCGT ACTGGCGACC
GACCTGGAGA GTTATGGGCG GTTTGTGGAA GAAGTGTTGC GCCGGCAGCC GGGGATTGCC
TCGATCCAGT CCAGCCTGGC GTTGCGCGAA GTGAAAGCGG TTTCGCGTGT ACCCGTACCC
TGA
|
|---|
| Protein sequence | MSKAFAIEEL DETDRELLRL LQADGTLSSA ALGERLSMTV TPCWRRRKRL EELGIIKDYQ
ANLDRRKLGY DVMAFAQVRF GNHSANAPDE FEQVILKLPQ VLSCHKVTGE ADYVLTVLAT
DLESYGRFVE EVLRRQPGIA SIQSSLALRE VKAVSRVPVP
|
|---|
| |