| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2188 |
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| Symbol | |
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| ID | 5869977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2441842 |
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| End bp | 2442945 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641547313 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001668425 |
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| Protein GI | 167033194 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.414153 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAGG TACTGAAGAT GATTGGTGGT CTGCTGCTGG CGTCTGGCGC CAGCCTGGCC
CAGGCGGCAG AGGTGGACAG CGCCAATACG TTACGGTTGT ACAACTGGAC CGACTACATC
GGCGAAACCA CCCTGGCCGA CTTCGAGAAG GCCACCGGCA TCAAGGTCAT CTACGACACC
TTCGACGGCT ACGAAACGGT ACAGACCAAA CTGCTCACCG GCCGCTCCGG TTACGACCTG
GTCATGCTCA ACGCCTCCCT CGTTCCCCCG CTGATCAGTG CCGGGGTATT CCAGGCGCTG
GACAAGCAGC AACTGCCCAG CTGGCACAAC CTCGACCAAC AGGTGGTCGA CAACCTGCAG
GGCTACGACC CGGGCCTTAA GTACTCGGCG CCCTACACCT GGGGCAGCTC GGGGGTCACC
TACAACGTCG ACAAGATCAA GGCGCGCATG CCCGACGCAC CGATCGGCTC GCTGGCCATG
CTGTTCGACC CCAAGATCGT CTCGCGCTTT GCCGACTGCG GCGTCACCCT GATGGACGCA
CCCACCGAAG TGATCCCGCT GGCCCTGCAG TACCTGGGCA AGGACCCGCG CAGCGCGTCG
CCGGCTGACC TCAAGGCGGC CGAACAGCTG CTGCTGGGCA TCCGCCCGTA CATTCGCAAG
TTCGACTCGG TGAATTATCT CACCAGCCTG CCCAATGGCG ATGTCTGCCT GGCGCTGACC
TGGTCCGGTG ACTACGCCAC CGCCCAGGCT CGCGCGGTGG AAGCGAAGAA GGACATCAAA
CTGTCGTTCT TCATCCCCCA GGAAGGTTCG CTGATCTGGT TCGACAACCT GTACATCCCC
AAGGATGCAC CGCACGCGGC CAACGCCCAC CGCTTCATCG AGTTCTTGCT GCAGCCGCAG
ACCATGGCCA AGGTCACCGA CTACATCCAC TACGCCAACA GCAACGCCGC CGCGACCGCG
CTGGTGCGTG ATGACATCCG CCAGGACCCG GCCATCTACC CGGACGCGTC AACCCGTGAA
CGCCTGTTCG CGCAGAAAAC CCAGAGCCCG AAGGACATGC GTGCCATCAC CCGGGTCTGG
AGCACGGTCA AGACCGGTTT CTGA
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| Protein sequence | MRKVLKMIGG LLLASGASLA QAAEVDSANT LRLYNWTDYI GETTLADFEK ATGIKVIYDT
FDGYETVQTK LLTGRSGYDL VMLNASLVPP LISAGVFQAL DKQQLPSWHN LDQQVVDNLQ
GYDPGLKYSA PYTWGSSGVT YNVDKIKARM PDAPIGSLAM LFDPKIVSRF ADCGVTLMDA
PTEVIPLALQ YLGKDPRSAS PADLKAAEQL LLGIRPYIRK FDSVNYLTSL PNGDVCLALT
WSGDYATAQA RAVEAKKDIK LSFFIPQEGS LIWFDNLYIP KDAPHAANAH RFIEFLLQPQ
TMAKVTDYIH YANSNAAATA LVRDDIRQDP AIYPDASTRE RLFAQKTQSP KDMRAITRVW
STVKTGF
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