| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2183 |
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| Symbol | |
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| ID | 5869972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2435432 |
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| End bp | 2437039 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641547308 |
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| Product | hypothetical protein |
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| Protein accession | YP_001668420 |
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| Protein GI | 167033189 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGAGC TGACCCTGAC CGCCGGCCAG GCACTGGTGC GCCTGCTGGC CAACTACGGC
GTACAGACCG TGTTCGGCAT CCCTGGGGTG CACACCCTGG AGCTGTACCG AGGCTTGCCG
GGCAGTGGCA TCCGCCACGT GCTGACCCGT CACGAGCAGG GCGCCGGTTT CATGGCTGAC
GGTTATGCGC GGGTGAGCGG CAAGCCGGGG GTGTGCTTCG TCATCACCGG CCCGGGTGTG
ACCAACGCCG CCACCGCCAT CGGTCAAGCC TATGCCGACT CGGTGCCAAT GCTGGTGATT
TCGAGCGTCA ACCACACCGC CAGCCTGGGC AAGGGCTGGG GTTGCCTGCA TGAAACCCAG
GACCAGCGTG CCATGACTGC GCCGATCACC GCGTTTTCGG CTGTGGCCTT GCGCGGCGAC
GACCTGCCCG AATTGATCGC CCGCGCCTGG GCTGTGTTCG ACAGCGAACG GCCACGCCCG
GTGCATATCT CGGTGCCGCT GGACGTGCTG GCGGCGCGCG TCAGCCGTGA CTGGAGCGAT
GAGGTGGTGC GCCGCCCTGC GCGTGGCCAG CCGTGCCGCG AAACCCTCGA CCAGGCTGCC
CTGAAACTGG CCACGGCCAA GCGGCCCATG ATCATCGCCG GTGGCGGTGC GTTGCACGCG
GCCGAGCAAT TGGCGCAGTT GAGCGCCCGG CTGGCGGCAC CGGTGTTCAC CAGCGTGGCC
GGCAAGGGCC TGCTGCCACC GCAGGCTCCC CTGAATGCGG GGGCCAGCCT GTGCGTGGAA
CCTGGCTGGC AGTTGATCAG CCAGGCCGAT GTGGTGCTGG CGGTAGGCAC CGAGATGGCC
GACACCGACT TCTGGCGCGA ACGCTTGCCG ATCATGGGCG AACTGCTGCG GGTGGACATC
GACCCGCGCA AGTTCAACGA TTTCTATCCC TGTGCCATTG CCCTGCTGGG AGACGCCCGG
CAAACCCTGG CCGGCTTGCT GGAGCACCTG TCAGCACTCC AGCGCGACCC TGCCCAGGCC
AGCGAGGCGG TAGCCAACCT GCGCCAGGCC ATCCGCAATG GGCATGCACC GTTGCAGGCG
ACCCACCAGG CCATTCTGGA CCGCATTGCC GCCGTACTAC CCGACAATGC CTTCATCAGC
AGTGACATGA CCCAGCTGGC CTACACCGGC AATTACGCCT TCGCCAGCCG GGCGCCACGC
AGCTGGCTGC ACCCCACCGG CTACGGCACC CTCGGCTATG GCCTGCCAGC CGGCATCGGC
GGCATGTTCG CCACCGACCA CCGCCCCGGC CTGGTGCTGG TGGGCGACGG CGGCTTCCTC
TACACCGCCC AGGAGCTGGC CACGGCGGTC GAAGAACTGC AGCGGCCGTT GGTGGTGTTG
CTGTGGAACA ATGACGCCCT TGGCCAGATC CGCGACGATA TGCTCGGCCT GGATATCGAG
CCGGTCGGCG TGCTGCCACG CAACCCGGAC TTCATCGGCC TGGCCCGCGC CTTCGGTTGC
ACAGTGCACC AGCCACGCGA CCTGGACGCG CTGCAGGCCG ACCTGGCCAG TGGCTTCGCC
ACCCCAGGCG TGACCTTCAT CGAACTCAAA CACACCTGCG TCTGCTAA
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| Protein sequence | MNELTLTAGQ ALVRLLANYG VQTVFGIPGV HTLELYRGLP GSGIRHVLTR HEQGAGFMAD
GYARVSGKPG VCFVITGPGV TNAATAIGQA YADSVPMLVI SSVNHTASLG KGWGCLHETQ
DQRAMTAPIT AFSAVALRGD DLPELIARAW AVFDSERPRP VHISVPLDVL AARVSRDWSD
EVVRRPARGQ PCRETLDQAA LKLATAKRPM IIAGGGALHA AEQLAQLSAR LAAPVFTSVA
GKGLLPPQAP LNAGASLCVE PGWQLISQAD VVLAVGTEMA DTDFWRERLP IMGELLRVDI
DPRKFNDFYP CAIALLGDAR QTLAGLLEHL SALQRDPAQA SEAVANLRQA IRNGHAPLQA
THQAILDRIA AVLPDNAFIS SDMTQLAYTG NYAFASRAPR SWLHPTGYGT LGYGLPAGIG
GMFATDHRPG LVLVGDGGFL YTAQELATAV EELQRPLVVL LWNNDALGQI RDDMLGLDIE
PVGVLPRNPD FIGLARAFGC TVHQPRDLDA LQADLASGFA TPGVTFIELK HTCVC
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