| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2179 |
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| Symbol | |
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| ID | 5869968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2429478 |
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| End bp | 2430884 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641547304 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001668416 |
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| Protein GI | 167033185 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0833] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0711158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATA CCGTTGAAAA AATCCAGCTC ACCCGGGCCC TGAAAAGCCG GCACATCTTC
ATGCTGTCGC TTGGCGGAGT GATTGGCACC GGCCTGTTCA TGGGCTCGGG CGTGACCATC
AACCAGGGCG GGCCGGTGGG TGCGATCCTG GCCTACCTGG TCGCGGGTTT GCTGATGTAC
CTGGTGATGG TCTGCCTGGG CGAACTGTCG GTGCAGATGC CGGTGTCCGG CTCGTTCCAG
GCCCATGCCA CCAAGTTCAT CGGCCCGGCC ACCGGCTTCA TGATCGGCTG GGTGTACTGG
ATGAGTTGGG CCACTACGGT GGGCCTGGAG TTCACCGCCG CCGGCATGCT GATGACCCGC
TGGTTCCCGG ACGTGCCGAT CTGGTACTGG TCGGCACTGT TCGTGGTGGT GCTGTTCGGC
CTCAATGCCC TGGCCACTCG CGCGTTTGGT GAAGCCGAGT ACTGGTTCTC GGGCATCAAA
GTGGCGACCA TCCTTGGCTT TATCATCATC GGCCTGCTGG TGATCTTCGG TGCCATCCCG
TTGACCAGCG GGGCGCCGGC GCCGATGCTG GACAACCTGG TGGGCGAGTC GCTGTTCCCC
CACGGCCTGT CGGCGGTGTT CGCGGTGATG ATGACGGTGG TCTATGCCTT CCAGGGCTGT
GAAATCATGG GCGTGGCGGC CGGCGAGACC GAGCACCCGG AAAAGAGCAT CCCGCGGGCG
GTGCGCAACG TGGTGTTCCG CGTGCTGATC TTCTACGTGC TGGCGATTGC GGTGCTGTCG
GCCATCGTGC CGTACGAGCA GGCTGGCCTG ATGGAAAGCC CGTTCGTGCA GGTGTTCGAC
ATGGTCGGCA TCCCCTTTGC TGCCGACGTG ATGAACTTCG TCATCCTCAC CGCCATTCTT
TCGGTGGGCA ACTCCGGGCT GTATGCCTCT ACGCGCATTC TTTGGGCGAT GTCCAAGAGC
GGCATGGCGC CGAAAAGCCT GTCGCCACTG AGCAAGCGCG GCGTGCCGCT GCGGGCGCTG
AGCATCACCC TGTGCTTTGC GCTGATCTCG CTGATGACCA GCTTCATTGC CGCCGACACG
CTGTTCATGG TGCTGATGGC GGTGAGCGGC ATGTCCGGTA CCGTGACCTG GATCGTCATC
GCCCTGGCGC AGTATCGCTT CCGCAAAGCC TACCTGCGTG ACGGTGGGCA GTTGCAGGAC
CTGAAGTACA GGGCGCCGCT GTATCCGTTG GTGCCGCTGC TGTGCATCAC CCTGTGCAGC
TCGCTGTTCG TGTTCCTGGC ATTGGATGAA ACCCAGCGGC CGTCGCTTTA CTGGGGCTTT
GGCTTCATTG CCCTGTGCTA CGCGGCGTAC TACTTCGTCA ATCGTCGCCG GCAAGGGGCA
TTCGAGCCTA GCGTCCCTGG CGTCTGA
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| Protein sequence | MTDTVEKIQL TRALKSRHIF MLSLGGVIGT GLFMGSGVTI NQGGPVGAIL AYLVAGLLMY
LVMVCLGELS VQMPVSGSFQ AHATKFIGPA TGFMIGWVYW MSWATTVGLE FTAAGMLMTR
WFPDVPIWYW SALFVVVLFG LNALATRAFG EAEYWFSGIK VATILGFIII GLLVIFGAIP
LTSGAPAPML DNLVGESLFP HGLSAVFAVM MTVVYAFQGC EIMGVAAGET EHPEKSIPRA
VRNVVFRVLI FYVLAIAVLS AIVPYEQAGL MESPFVQVFD MVGIPFAADV MNFVILTAIL
SVGNSGLYAS TRILWAMSKS GMAPKSLSPL SKRGVPLRAL SITLCFALIS LMTSFIAADT
LFMVLMAVSG MSGTVTWIVI ALAQYRFRKA YLRDGGQLQD LKYRAPLYPL VPLLCITLCS
SLFVFLALDE TQRPSLYWGF GFIALCYAAY YFVNRRRQGA FEPSVPGV
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