Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2178 |
Symbol | |
ID | 5869967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2427029 |
End bp | 2429281 |
Gene Length | 2253 bp |
Protein Length | 750 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641547303 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_001668415 |
Protein GI | 167033184 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00477296 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATACGCC TGCGCACCGA CGGCCTGCTG CGTCGCCTGC TGCTGTTCAT CCTGCTGTTC AGCCTGTGCT TCACCGTGCT GGCCAGTGGC GTGCAGCTGT ACATCGAGTA CCGCCGCGAA ATGCGTGACA TAGACGCACG CATGGCGTTG ATCCGCGCCG GCTACCTGGC CAGCCTGGAG CGTAGCCTGT GGGACCTGGA CGAGGCGCAG CTGGATGTGC AACTGCGCGG CCTGGTGGAC TTTTCCGATG TGGCGCGGGT GCGCCTGGTC AGTGATGATT TCCAGTTGTT GCGCGGTGAG GCCGAAGCCA CAGGGCCGCT GCGCATCGAG CGCTTCCCCC TTGATTATCA GCCACCCTCG GGGCCGCCCA GGCACCTGGG CGAGCTGGAA GTCAGCATCG ACCTGGGCGC GGTGCACCGC CGGTTGTACG CCACAGGCCT TGCCAGCCTG CTGTGGATGG GCGTGTTTCT GTGCGGCCTG GCAGTGGCAC TGTCGGGGCT GTTCTACCGC CTGGTCACCC GCCACCTGCA AGTGATGGCC GAATTTGCCC GTCGTATTGG CGCCGGCCAG TGGCAGGAGC CGTTGCGCCT GGGGCGCCGA CGTTCAGCGC GCCCCGATGA GATCGACACG GTGGCCAATG CCCTGGACGA TATGCGCCGC GCCATCCTCA GCGATATCGA GCGCCGTGAG CGCGACCGCC TGGAGCTGCA GGGCAAGCGC GACGAATTGC AGGCCATGGT CGAGCGGCGT ACGGCCAGCC TGGCCCGCGC CAAGGACGAG GCCGAGGCTG CCAACCTGGC CAAGTCACGC TTCCTGGCGA CCATGAGCCA TGAACTGCGC ACGCCGCTCA ACGGCATTCT GGGCATGGCC GAACTGCTGC GCGGCGGGCG CCTGGAGGCG GCCGACCGCC AGCGTGTCGA GGCCTTGTAC AAAGCCGGCG AGGGCCTGCT GGCGATTCTC AACGAGGTGC TGTATTTCGC CCGGCTCGAA GAAGGCGAAA GCCGCGCCGA GCTGGTAGGT TTTTCCTTGC GCCAGTTGTG CCAGGAAGTG CTGGCGTTGC TCGAACCCAT GGCCATGGAA AACGCCGACA CCCTGCAACT GCATGTCGAT GAGCAGTTGG CCGCGCACCA GCACGGCGCC GAGCAATACC TGCGCCAGGT GCTGAGCAAC CTGCTGGCCA ATGCCATCAA GTTCACCGAG CACGGCCAGG TACAGCTTAC GGTGCAGGTG CTGGCCAGCA ACGAACGCTC GCAGCGCCTG CGGTTGTCGG TCAGTGACAA TGGCATCGGC ATCGAGCCCG CCGTACAGGC GAAGATCTTC GACCGCTTCG TCCAGGCCAG CGAAACAGTG GCGCGTCGCT ATGGCGGCAC TGGCCTGGGC CTGGCGATCT GCAAGCACCT GGTGGAAAAA CTGGGCGGCA GCATCGGCCT GGACAGTGTG CAAGGGCAGG GCAGTTGCTT CTGGTTCGAG CTTGACATGG CACGCGGGCA GCCCGTGCCT GCCGGCTCAC CTGCCCCTTT GTCCTTGCTA AGCCTGGATA TCCTGGTGGT CGAGGACGTT GCGCTGAACC GCGAGGTGGC GGGTGGCCTG CTGCTGCGCG ATGGCCACCG GGTGAGCTTT GCCGAAGACG CCGGGCAAGC CCTGCAGGCG TGTGCGCAGC GGCGCTTCGA TCTGGTCTTG CTTGACGTGC ACTTGCCGGG CATGAGCGGG GTGGAGTTGT GCCGACAGCT GCGTGCCTCG CCTGGTCCGA ACCGCCACAG TCGGATCCTG GCACTGACGG CTGGCGTGCA GCCGGGGCAG GTATCGGGCT ACCTGGATGC TGGCATGCAA GGGGTACTGG CCAAGCCCTT GCGGCTGGAC AACCTGCGCG AGGCGCTGGC CGAAGTAGCC TGCGGCGAAG TGACCAGCGC TGACGCAGAC ATGGACTGGT CACTGCTGGA CACCCACCGC TCGCTGCTGG GCAAACAGAA GCTGCAAGGC CTGTTGAAGG TGCTGCGCCA ATCACTGGAG CAGCATGCCA CGGCGCTGGC CGAGGCGCTG CCGGCCCAGG ACTTCACCGA AGTGCTGCAC CTGGCCCATC GCCTGGCCGG TAGCTGCGAT TCCTTGGGGT TCGCCGGGCT GGCAGCGCTG TTGCATCGCC TGGAAGAGGC GGCCCGGCAG CAGGACATCG AGGCGATGCA AACCCTCGAC GGGCCGCTGG CCACCCAGCT AAGTCAGGCC CGCGCCACGC TGGAACAGCT GATCCAGAGC TGA
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Protein sequence | MIRLRTDGLL RRLLLFILLF SLCFTVLASG VQLYIEYRRE MRDIDARMAL IRAGYLASLE RSLWDLDEAQ LDVQLRGLVD FSDVARVRLV SDDFQLLRGE AEATGPLRIE RFPLDYQPPS GPPRHLGELE VSIDLGAVHR RLYATGLASL LWMGVFLCGL AVALSGLFYR LVTRHLQVMA EFARRIGAGQ WQEPLRLGRR RSARPDEIDT VANALDDMRR AILSDIERRE RDRLELQGKR DELQAMVERR TASLARAKDE AEAANLAKSR FLATMSHELR TPLNGILGMA ELLRGGRLEA ADRQRVEALY KAGEGLLAIL NEVLYFARLE EGESRAELVG FSLRQLCQEV LALLEPMAME NADTLQLHVD EQLAAHQHGA EQYLRQVLSN LLANAIKFTE HGQVQLTVQV LASNERSQRL RLSVSDNGIG IEPAVQAKIF DRFVQASETV ARRYGGTGLG LAICKHLVEK LGGSIGLDSV QGQGSCFWFE LDMARGQPVP AGSPAPLSLL SLDILVVEDV ALNREVAGGL LLRDGHRVSF AEDAGQALQA CAQRRFDLVL LDVHLPGMSG VELCRQLRAS PGPNRHSRIL ALTAGVQPGQ VSGYLDAGMQ GVLAKPLRLD NLREALAEVA CGEVTSADAD MDWSLLDTHR SLLGKQKLQG LLKVLRQSLE QHATALAEAL PAQDFTEVLH LAHRLAGSCD SLGFAGLAAL LHRLEEAARQ QDIEAMQTLD GPLATQLSQA RATLEQLIQS
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