| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2173 |
|---|
| Symbol | |
|---|
| ID | 5869962 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 2422763 |
|---|
| End bp | 2423818 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641547298 |
|---|
| Product | putative lipoprotein |
|---|
| Protein accession | YP_001668410 |
|---|
| Protein GI | 167033179 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5621] Predicted secreted hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.296969 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGTA ATGCGTGGCT GTTGCTCAGC GTGTTGTTGT GCGGCTGTGA TCAACCAGCA
CCACAGAGTT ATGCCGGGCT TGGGCAGCAG GCCGGCGAAC TCAGCCAGGT GACCCGCGAC
CATCGGCTGG CATTTCCACA GGACCACGGT CCACACGATG GTTTTCGTAT CGAGTGGTGG
TATGTCACCG CCAACCTGAA GGACGCTCAA GGCCGTGACT GGGGCGCCCA GTGGACGCTG
TTCCGCTCGG CCCTGCGCCC AGGCCCGGAG ACCACCGACT GGAACAGCCC GAACCTGTGG
ATGGGGCACG CGGCCTTGAC CGGTCCGGGC GGCCACCAGT CTGGCGAAAC CCTGGCGCGC
GGCGGTATCG GCCAGGCCGG AGTGCAGGCT CAGCCGTTCC GAGCGTGGAT CGATGACTGG
TCGTTGCAGG GCAGGGGCAG TATCGAAAAC CTGCAGATGG TCGCCGGTGG CGATGGTTTT
CGCTATGACT TGCAGTTGCA CAGCGATCAC CCTCTGGTGC TGCACGGGGA GCAAGGTTAC
AGCGAGAAAT CTGGCAAGGG GCAGGCTTCG TACTATTACA GCCAGCCTTT CTACCAAGTG
CAGGGGCACA TTCAGCGTGG CAGCCAGTGC ATCGCGGTCA CTGGGCAGGC CTGGCTGGAC
CGGGAATGGA GCAGCCAACC GCTGGCGTCA GGGCAAACGG GCTGGGACTG GTTTTCGCTG
CACCTGGACA GTGGTGCCAA GCTGATGCTG TTTCAGGTAC GCGAGGCGCG AGGGGACGCG
TACCGCGCTG GGACCTGGGT TGGGCCGCAG GGTGAGGTGG TGGCGCTGGA CGCAGCGCAG
ATTCAGTTGC AGGCGCAAGC CTGGTCTGCG CAGAAAAACG GCAAAAAGGT GCCGACACGG
TGGCGGGTGC AGGTGCCTGG GCATGGAGTG GATGTGCAGG TTGATGCCGT GGAGCCGCAG
GCGTGGATGC AGACGCGATT CCCTTACTGG GAAGGGCCGG TGCGGTTGAG CGGGAGCGCG
GGTGGGCGCG GGTATCTGGA GATGACTGGA TATTAG
|
|---|
| Protein sequence | MKRNAWLLLS VLLCGCDQPA PQSYAGLGQQ AGELSQVTRD HRLAFPQDHG PHDGFRIEWW
YVTANLKDAQ GRDWGAQWTL FRSALRPGPE TTDWNSPNLW MGHAALTGPG GHQSGETLAR
GGIGQAGVQA QPFRAWIDDW SLQGRGSIEN LQMVAGGDGF RYDLQLHSDH PLVLHGEQGY
SEKSGKGQAS YYYSQPFYQV QGHIQRGSQC IAVTGQAWLD REWSSQPLAS GQTGWDWFSL
HLDSGAKLML FQVREARGDA YRAGTWVGPQ GEVVALDAAQ IQLQAQAWSA QKNGKKVPTR
WRVQVPGHGV DVQVDAVEPQ AWMQTRFPYW EGPVRLSGSA GGRGYLEMTG Y
|
|---|
| |