Gene PputGB1_2170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2170 
Symbol 
ID5869959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2418365 
End bp2419432 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content63% 
IMG OID641547295 
ProductRieske (2Fe-2S) domain-containing protein 
Protein accessionYP_001668407 
Protein GI167033176 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.461217 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCCCA AAAACACCTG GTACGTTGCC TGCACCCCCG ACGAGATCGC CACCAAGCCC 
TTGGGCCGGC GGATCTGCGG GGAAAAAATC GTGTTCTACC GTGGCCACGA GAACCGTGTA
GCCGCCGTCG AGGATTTCTG CCCGCACCGT GGTGCGCCGT TGTCGCTTGG CTATGTCGAG
GACGGCAACC TGGTATGCGG CTACCACGGC CTGGTCATGG GCTGCGATGG CAAGACCGTG
TCGATGCCCG GCCAGCGGGT ACGGGGCTTT CCCTGCAACA AGACTTTCGC TGCAGTCGAG
CGCTATGGCT TTGTCTGGGT ATGGCCAGGC GACCAGGCGC AGGCCGACCC GGCGCTGATT
CCGCACCTTG AATGGGCGGT GAATGATGAA TGGGCCTACG GTGGCGGGCT GTTCCACATC
GGTTGCGACT ACCGCCTGAT GATCGACAAC CTGATGGACC TCACCCACGA AACCTACGTG
CATGCCTCCA GCATCGGCCA GAAGGAAATC GACGAGGCCC CGCCAGTCAC CACCGTCACC
GGCGACGAAG TGGTCACCGC CCGGCACATG GAAAACATCA TGGCCCCGCC CTTCTGGCGC
ATGGCCCTGC GTGGCAACGG CCTGGCCGAT GATGTACCGG TGGACCGTTG GCAGATCTGC
CGCTTCACCC CGCCTAGCCA TGTGCTGATC GAAGTGGGTG TGGCGCATGC CGGCAAGGGT
GGCTACCACG CCGAGGCGCA GCACAAGGCG TCGAGCATCG TGGTGGATTT CATCACGCCA
GAGACCGACA CATCGATTTG GTACTTCTGG GGCATGGCAC GCAACTTCGC CGCGCATGAC
CAAACCCTGA CCGACAACAT CCGCGAAGGC CAAGGCAAGA TTTTCAGCGA AGACCTGGAG
ATGCTCGAAC GCCAGCAGCA GAACCTGCTG GCCCACCCCG AGCGCAACCT GCTGAAGCTG
AACATCGATG CTGGCGGCGT GCAGTCGCGC AAGGTGCTGG AGCGCATCAT CGCCAAAGAG
CGTGCGCCAC AACCGCAACT GATCGCTACC AGCGCCACCC CTGCCTGA
 
Protein sequence
MYPKNTWYVA CTPDEIATKP LGRRICGEKI VFYRGHENRV AAVEDFCPHR GAPLSLGYVE 
DGNLVCGYHG LVMGCDGKTV SMPGQRVRGF PCNKTFAAVE RYGFVWVWPG DQAQADPALI
PHLEWAVNDE WAYGGGLFHI GCDYRLMIDN LMDLTHETYV HASSIGQKEI DEAPPVTTVT
GDEVVTARHM ENIMAPPFWR MALRGNGLAD DVPVDRWQIC RFTPPSHVLI EVGVAHAGKG
GYHAEAQHKA SSIVVDFITP ETDTSIWYFW GMARNFAAHD QTLTDNIREG QGKIFSEDLE
MLERQQQNLL AHPERNLLKL NIDAGGVQSR KVLERIIAKE RAPQPQLIAT SATPA