| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2169 |
|---|
| Symbol | |
|---|
| ID | 5869958 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 2417402 |
|---|
| End bp | 2418352 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641547294 |
|---|
| Product | ferredoxin |
|---|
| Protein accession | YP_001668406 |
|---|
| Protein GI | 167033175 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.0772713 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGATG CCGTAGTGGT GTCCCGTAAC GACGAAGCGC AAGGTATTTG CAGCTTCGAG
CTGGCGGCAG CGGATGGCAG CTTGCTGCCG GCGTTCAGCG CTGGCGCGCA TATCGACGTG
CATTTGCCCG ATGGGTTGGT GCGCCAGTAT TCGCTGTGCA ACCACCCCGA GGAGCGCCAC
CGTTACCTGA TTGGCGTGCT CAACGACCCG GCTTCGCGGG GAGGCTCACG CAGCCTGCAC
GAGCAGGTGC AGGCCGGCGC ACGGCTGCGC ATCAGCGCGC CGCGCAACCT GTTCCCGCTG
GCCGAGGGGG CGCAGCGCAG CCTGCTGTTT GCCGGTGGCA TCGGCATTAC CCCGATTCTG
TGCATGGCCG AGCAGCTGTC CCACAGCGGC CATGACTTCG AGCTGCACTA CTGCGCCCGC
TCCAGCGAGC GTGCGGCCTT TGTCGAACGC ATTCGCAACG CGCCGTTCGC CGACCGCCTG
TTCGTACACT TTGACGAGCA ACCGGAAACC GCACTGGATA TCGCCCGGGT GCTGGGCAAC
CCGCAAGAGG ATGCGCACCT GTATGTCTGC GGGCCCGGCG GGTTCATGCA GCATGTGCTG
GACAGCGCCA AGGGACTGGG CTGGCAGGAG GCCAACCTGC ACCGCGAGTA TTTTGCCGCA
GCGCCGGTGG ATGCCAGCAA CGACGGTAGC TTCTCGGTGC AGGTGGGCAG CACGGGGCAG
GTGTTCGAGG TGCCGGCCGA CCAGACCGTG GTGCAGGTGC TGGAACAGCA CGGTATCGAG
ATTGCCATGT CGTGCGAACA GGGTATCTGC GGCACCTGCC TGACGCGCGT GCTGCAGGGT
ACGCCGGACC ACCGCGACAT GTTCCTTACC GAAGAGGAGC AGGCGCTGAA CGATCAGTTC
ACGCCCTGCT GCTCGCGCTC GAAAACGCCG CTGCTGGTGC TGGATATCTG A
|
|---|
| Protein sequence | MIDAVVVSRN DEAQGICSFE LAAADGSLLP AFSAGAHIDV HLPDGLVRQY SLCNHPEERH
RYLIGVLNDP ASRGGSRSLH EQVQAGARLR ISAPRNLFPL AEGAQRSLLF AGGIGITPIL
CMAEQLSHSG HDFELHYCAR SSERAAFVER IRNAPFADRL FVHFDEQPET ALDIARVLGN
PQEDAHLYVC GPGGFMQHVL DSAKGLGWQE ANLHREYFAA APVDASNDGS FSVQVGSTGQ
VFEVPADQTV VQVLEQHGIE IAMSCEQGIC GTCLTRVLQG TPDHRDMFLT EEEQALNDQF
TPCCSRSKTP LLVLDI
|
|---|
| |