| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2158 |
|---|
| Symbol | glcE |
|---|
| ID | 5869947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 2404202 |
|---|
| End bp | 2405254 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641547283 |
|---|
| Product | glycolate oxidase FAD binding subunit |
|---|
| Protein accession | YP_001668395 |
|---|
| Protein GI | 167033164 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.225237 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATGG ACCGCGACAT GAGCCAGGCA CTGCTGGAAC AGGTAAACCA GGCGCTGAAC
CAACGCACGC CACTGCGTAT CCAGGGCAGC AACAGCAAGG CGATGCTCGG CAACCCAGTG
GCCGGTGAAG TGCTCGATAC CCGCAGCCAC CGCGGCATCG TCAGCTACGA TCCGACCGAA
CTGGTGCTCA CCGCCCGCGC CGGCACGCCG CTGCGCGAAA TCGAGGCGGC CCTGCACGAA
GCCGGCCAGA TGCTGCCCTG CGAACCACCG CACCTGGGCC CGGAAGCCAC GCTGGGAGGG
ATGGTCGCGG CCGGGTTGTC TGGCCCACGG CGGCCGTGGG CCGGGTCGGT GCGTGACTAT
GTGCTTGGCA CCCGCGTGAT CACCGGCCAC GGCAAGCTGT TGCGCTTTGG CGGCGAGGTG
ATGAAGAACG TGGCCGGTTA CGATGTATCA CGCCTGATGG CGGGCAGCTT CGGCTGCCTG
GGGCTGCTGA CCGAAGTGTC GCTGAAAGTG CTGCCACGCC CACGTCAATG CCTTGGCCTG
CGCCTGCCGA TGAGCCGCCA TGAAGCCCTG GCGGAGCTGG CCGAATGGGG GCAGCAACCG
CTACCGATCA GCGCCGCCTG CCATGACGGC GAAGCACTTT ACCTGCGCCT GGAAGGCGGC
GAAGGCTCGG TGCAGTCGGC GTACCGGCGG CTGGGTGGCG AAACACTCCA CAACCGGTTC
TGGAGCGACC TGCGCGAACA ACGGCTGCCA TTTTTTGCCG GCGCCGCTCC GCTGTGGCGC
CTGTCCGTAC CCAACGCCTG CGGCGAGCTG GACCTGCCCG GCCAACAGCT GATCGACTGG
GGTGGCGCCC AGCGCTGGCT CACAACCGGC GCACCGGTTC AGGCCATTCG CGACCAGGTC
GCCAAGGTGG GCGGCCACGC CACCTGCTAT GCCCCCGGTG CAGCCAGCAG CCCGCCGCTG
TCCGCCGCCC TGATGCGCTA CCACCGCGCC CTCAAGCAGC AGCTCGACCC CCAGGGGGTG
TTCAACCCCG GTCGCCTGTA CCCGGACCTG TGA
|
|---|
| Protein sequence | MSMDRDMSQA LLEQVNQALN QRTPLRIQGS NSKAMLGNPV AGEVLDTRSH RGIVSYDPTE
LVLTARAGTP LREIEAALHE AGQMLPCEPP HLGPEATLGG MVAAGLSGPR RPWAGSVRDY
VLGTRVITGH GKLLRFGGEV MKNVAGYDVS RLMAGSFGCL GLLTEVSLKV LPRPRQCLGL
RLPMSRHEAL AELAEWGQQP LPISAACHDG EALYLRLEGG EGSVQSAYRR LGGETLHNRF
WSDLREQRLP FFAGAAPLWR LSVPNACGEL DLPGQQLIDW GGAQRWLTTG APVQAIRDQV
AKVGGHATCY APGAASSPPL SAALMRYHRA LKQQLDPQGV FNPGRLYPDL
|
|---|
| |