| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2156 |
|---|
| Symbol | |
|---|
| ID | 5869945 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 2402566 |
|---|
| End bp | 2402964 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641547281 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001668393 |
|---|
| Protein GI | 167033162 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.0998153 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATAGCA AGTTCGTGAT CGGCCAGGCC GAAATTGCCC GCGTACTGAG CGCCGCGCGC
CAGGAAGCCC AGGCGCAGCA ATGGAACGTG ACCATCGCCG TGGTCGACGA CGGCGGCCAT
CCGCTGGCCC TGGAGCGCCT GGACGGCTGC GCGCCCGCCA GTGCTTACAT CGCAATGGAA
AAGGCGCGCA CTGCCGCATT GGGGCGCAAG GAGACGCGGG ATTATGAAGA GATGGTCAAT
AGCGGCCGTA CTGCTTTCGT GACCGCGCCG CTGCTGACCA GCCTGGAAGG CGGCGTGCCG
CTGCGGGTGG AAGGCCAGGT GGTAGGCGCG ATTGGCGTGT CCGGGGTCAA GTCCGAGCAG
GATGCCCAGG TGGCCAAGGC TGGGGCCGCC GCGCTCTGA
|
|---|
| Protein sequence | MHSKFVIGQA EIARVLSAAR QEAQAQQWNV TIAVVDDGGH PLALERLDGC APASAYIAME
KARTAALGRK ETRDYEEMVN SGRTAFVTAP LLTSLEGGVP LRVEGQVVGA IGVSGVKSEQ
DAQVAKAGAA AL
|
|---|
| |