| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2153 |
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| Symbol | |
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| ID | 5869942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2399850 |
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| End bp | 2401358 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641547278 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001668390 |
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| Protein GI | 167033159 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0387109 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCCGT GCCTGCAGAT ATTGCGCACA CCCCTGATCC GCTATCCTGA GCACTCCCCT
GCTCTGGACC GCCCCATGGA ACTGCACATT CGTCTGGAGG GCCGCAAAGG CCTGGCCGAT
CAGCTTTACC AGCAATTGCG CGACGGTATC GACAGCGGCC ACTTGGCCGC CGGCACCCAA
CTGCCACCTA CCCGCCTGCT GGCAGAACAA CTGGGCGTCT CGCGCAAGAC CGTGGCCGAA
GCCTATTCAC GGCTAACCTA CGACAACCTG CTCAGCGGCG TGGTCGGCCG TGGCACCTTC
GTCACCCCGC GCCATCCGCT GCGCAATAAC GAAGCAGACA CCATCCCCCT GGCCGGCGCC
GCCTCCCTCG AGCGCTGGCA GCAACGCGCC ACCGTGCTCG GCCAACGCCA GCTGCACGCA
CCCTCGCGCT ATGACTTCGT CGGCGGTGCT TCGAGCAAGG CGCAGTTCCC GTTTGACCAG
TGGCGCAGTT GCCTAAACTA CGCGCTGCGC CGTAGCCAGC GCCACCCCGA GCGACAATTT
CCGGCCCAGG GCCTGCCGGA GCTGCGCGAA GCCATTGCCC ACCACATCGC CTACGCGCGC
GGTGTGCACT GCAGCGCAGC CGACCTGCTG GTGTGCAACG GCGCCCAGCA GGCACTGGAC
CTGATCGCCC GGGTGCTGGT CGAGCCAGGC TGCCAGGTGG CGATGGAAGA CCCCGGATAC
CCGCCGGCCC GGCAACTGTT TCTGGCCCTG GGTGCACGGC TGCAGTCGGT TCCGGTGGAT
GGAGAAGGCC TGTGCGTGGA GCAGATCGCC GACGGCACCC GGCTGATCTA CGTGACGCCC
TCGCACCAGT TCCCACTCGG CATGCCGATG AGCGAGCCAC GCCGGCACGC CCTGCTGGCA
CGGGCTGCCG AGCTGGGGGC ACTGATCATC GAAGACGATT ACGACTGCGA ATTCCGTTAC
CACGGGCCGG CCTCGGATGC ACTCAAGCGC CTCGACCGCC ATGGCCTGGT GGCTTATGTG
GGGACTTTTT CCAAGACCTT GCTGCCCGAG CTGAGGCTGG GCTATGCCGT GTTGCCACCC
GCCGTGTTGC AGGCCGCTTG CGTGGCCAAG CACCTCAGCG ATTGGCACAG CCCGACCTTG
CTGCAGTGGG CGCTGGCGCG CTTTCTGGGC GAAGGCCACC TGAACAAGCA CATCCGCCGC
TGCCACGAAG TCTACAGTGC CCGCCGTGAG CGTATCCTGG CACGCCTGGG CGGCGACCTG
GCACCCTGGT TCAGCGCCAT CCCCGCCAGC GCCGGCTTCC ACCTCAGTGC CCTGGCCTCA
CCCGGGGTGG ATGTGGAGTT GCTGGCCAAC CTCGCACGCA AGGTGGAGGT CGGCCTGTAT
TCGCTGGCGC CGTTCTTCAG CGAAGCGCCG TTGCGCCCTG GGCTATTGCT GGGCTTCGGC
GCCATCGAAT TGCTGGACAT CGACCCAGCA CTGGACAGAG TGCGCGATAC CCTGCAACGC
CTCAGTTGA
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| Protein sequence | MQPCLQILRT PLIRYPEHSP ALDRPMELHI RLEGRKGLAD QLYQQLRDGI DSGHLAAGTQ
LPPTRLLAEQ LGVSRKTVAE AYSRLTYDNL LSGVVGRGTF VTPRHPLRNN EADTIPLAGA
ASLERWQQRA TVLGQRQLHA PSRYDFVGGA SSKAQFPFDQ WRSCLNYALR RSQRHPERQF
PAQGLPELRE AIAHHIAYAR GVHCSAADLL VCNGAQQALD LIARVLVEPG CQVAMEDPGY
PPARQLFLAL GARLQSVPVD GEGLCVEQIA DGTRLIYVTP SHQFPLGMPM SEPRRHALLA
RAAELGALII EDDYDCEFRY HGPASDALKR LDRHGLVAYV GTFSKTLLPE LRLGYAVLPP
AVLQAACVAK HLSDWHSPTL LQWALARFLG EGHLNKHIRR CHEVYSARRE RILARLGGDL
APWFSAIPAS AGFHLSALAS PGVDVELLAN LARKVEVGLY SLAPFFSEAP LRPGLLLGFG
AIELLDIDPA LDRVRDTLQR LS
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