Gene PputGB1_2152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2152 
Symbol 
ID5869941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2398661 
End bp2399857 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content68% 
IMG OID641547277 
Productmajor facilitator transporter 
Protein accessionYP_001668389 
Protein GI167033158 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2807] Cyanate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0222111 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGCTG CCTTGAACCT GTTGCTGGTG ATTTTGCTGG CGCTGAACTT GCGGCCGATC 
CTGACCAGTA TCGGCCCGTT ACTCGAACCC ATGCGCGCCA GCACCGGCCT GGGCTACCAG
CAGGCCGCCT TGCTGACGGC ATTACCGGTG CTGTGCATGG GCCTGGTGCC GTTGCTGCAA
CCGTGGCTGC GACGCTGGGT CAGCGAACAT GGCGGTATGC TCGGGGGCCT GGCCGCGATT
GCCCTGGCCT GCCTGTGGCG CCTGCAGCTG GACAGTGCCT GGGCGCTGAT CGCCAGTGCG
GTGGTCGCCG GCCTGGGCGT GGCAGTGGTG CAGGGCATGA TGCCGGGCCT GGTCAACCGC
TGGTTCCCCG GGCGTTTGGC TGGGGCGATG GGCTTGTATT CGGCCGCGCT GATGAGCGGC
GGCGGCCTGG CTGCAGTGCT CGGGCCACAC ATCAGCGGCC ATTTCGGTCA CTGGCAAGCC
GGCCTGGGCC TGTGGGCGAT CCCGGCAGTG CTGGCGGTGC TGGCCTGGGC CGTGCTGCGG
CCGCGCCAGG AAGCGCCGAA GTTGGCGGGG GCTACTGGCG GGCATTGGTT CGGCACCCGC
CGGGCGTGGT TGCTGGCCCT GTACTTCGGC CTGATCAACG GCGGCTACAC CAGCATGGTG
GCCTGGTTGC CGGCTTACCA CACCGAGCAC GGCGGCAGCG CCCAGGGCGG TGCCGATCTG
GTGGGCCTGA TGACCGTGTT CCAGGTGGCA GGTGCGCTCG GCCTGCCGCT GCTGTTGCGG
CGTTGGGCCG ACCGGCGCCC AGGCCTGTGG CTGGCGCTGG CAATCCAGCT GGCGGGATTC
CTCGGCCTGC TGCTGGTACC TACGCAGGCT TCGGGGCTGT GGGTAGCCAT GATCGGTTTT
GGACTGGGCG CCTGCTTCAG CCAAAGCCTG ACGCTGACCC TGGAGCACCT GAAAACGCCT
GCCGAGGCGG GCAGCCTGGC GGCGTTCGTG CAGGGCATCG GCTTTATCAT CACCGGTATC
GTGCCGTACA TCACCGGCTG GCTGCGTGAT GTCAGTGGCG ACTTCCAGGC TTCTTGGACG
CTGCTGACCG TGACTGTTCT GGCAATGTTG CTGGTGACCG TGTGCTTCAA CCCGCGTGGC
TATGCGGCGG CCATCGCCCG CCCGGCGGTA ATGGGCAAGG CCGCGCCGGT CAACTGA
 
Protein sequence
MRAALNLLLV ILLALNLRPI LTSIGPLLEP MRASTGLGYQ QAALLTALPV LCMGLVPLLQ 
PWLRRWVSEH GGMLGGLAAI ALACLWRLQL DSAWALIASA VVAGLGVAVV QGMMPGLVNR
WFPGRLAGAM GLYSAALMSG GGLAAVLGPH ISGHFGHWQA GLGLWAIPAV LAVLAWAVLR
PRQEAPKLAG ATGGHWFGTR RAWLLALYFG LINGGYTSMV AWLPAYHTEH GGSAQGGADL
VGLMTVFQVA GALGLPLLLR RWADRRPGLW LALAIQLAGF LGLLLVPTQA SGLWVAMIGF
GLGACFSQSL TLTLEHLKTP AEAGSLAAFV QGIGFIITGI VPYITGWLRD VSGDFQASWT
LLTVTVLAML LVTVCFNPRG YAAAIARPAV MGKAAPVN