| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2147 |
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| Symbol | |
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| ID | 5869936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2394188 |
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| End bp | 2394769 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641547272 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001668384 |
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| Protein GI | 167033153 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.576982 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00198138 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCCCGG TCAATGCCGC AATGCGCTGT GCCAACTTTG AAGAGCGACG TGACCGGGCC
ATGGCGCTGT TTGCCGAAAA GGGCTTTGGC CAGGTCAGCA TGCGCGAGCT GGCGGCCCAT
GTGGGGCTGA CCGCCGGCTC GCTGTACCAT CACTTCCCCA GTAAGCAGGA CCTGTTGTAC
GACTTGATCG AGGAGTTGTA CGAGGAGCTG CAGGCCACCC TGGACCAAGG ACGACGGGCC
ATGGCACGTG GTTCGTCGGC ATTGAGCTGC CTGATTGCCG CGCACTGGCA GTTGCATGCC
GAGCGCCCGC TGCAGTTTCG CCTGGCCGAG CGCGACCTGT GCTGCCTGAG CGATGACCAG
CGGGCACGCC TGGCCTTGTT GCGCAAGCGT TACGAGGCGG GGTTGCTGAG GTTGATCGCG
CCGCAGGCGG CGTTGCAGGG GGAGGCTTTG GTGGCCACCG CGCATGTTGT GGCGACGCTG
CTGAACCAGT TGCCGGGGAT GTTGAAGGCA CTCCCCGAGG AACAGGGGCT GGGGTTGATG
GAGAGCATGT TGATGGGTGG ATTGGAGCGG ACCCTGCGTT AG
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| Protein sequence | MPPVNAAMRC ANFEERRDRA MALFAEKGFG QVSMRELAAH VGLTAGSLYH HFPSKQDLLY
DLIEELYEEL QATLDQGRRA MARGSSALSC LIAAHWQLHA ERPLQFRLAE RDLCCLSDDQ
RARLALLRKR YEAGLLRLIA PQAALQGEAL VATAHVVATL LNQLPGMLKA LPEEQGLGLM
ESMLMGGLER TLR
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