Gene PputGB1_2142 details

Gene Information

• Locus tag: PputGB1_2142
• ID: 5869931
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas putida GB-1
• Kingdom: Bacteria
• Replicon accession: NC_010322
• Strand: +
• Start bp: 2387556
• End bp: 2391005
• Gene Length: 3450 bp
• Protein Length: 1149 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 641547267
• Product: multi-sensor hybrid histidine kinase
• Protein accession: YP_001668379
• Protein GI: 167033148
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG0642] Signal transduction histidine kinase

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.694825
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 17
• Fosmid unclonability p-value: 0.00121197
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGGACCAGC GCAGCTTTCG CAAGCTGTTG AGCCGCAACA TCGGCCTCCC TCTGGGGGTG 
GGCCTGCTGG GGGCCGTGGC CTTCGTCGCG GTGATCAACT ACCTGCTCTC AGCCATGCAG 
TGGGTCGAGC ACACCGACCG GGTGATCGGC AATGCCAACG AAACGGTCAA GCTGTCGATC 
GACATGGAAA CCGGCATGCG CGGTTTCCTG ATCACGGGTG ACGAGCGTTT CCTTGACCCC 
TACGAGGTGG CCAAGCCGCG CATTCTCGGC AGCCTGCAAA GCCTGCGCGG CATGGTCGAA 
GACAACCCGC AGCAGGTCGA CCGTATCGAC CGGCTGATCG CCTTGCAGCA AGCCTGGAAC 
ACCTTCGGCA GCGAGATGAT TGCCCTGCGC CGCACCCAAG GCGACTATCA GGCATCGATC 
GGCAATGGCC GCGGCAAGCG CCTGACCGAC GAGATCCGCA AGGAGTTCGA CGGCCTGATC 
GGCACTGAAC AGCAATTGCG CATGGCCCGT AACGAAAAGG TCAGCAGCGT TACCGTCACG 
GCCATTTCGG TGTTCGTGCT GTTCATCGTC GGCCTGAGTG CCTTGCTCGC CTACCTGGGC 
CGGCGCGACC TGCTGGCGCT GTCTGGCAGC TACGAAGAAA ACGCCAAGGC CCAGCAGCGT 
GCGGCCGAGC GCCTGGAGCA CCAGGCCTGG CTGCGCAACG GGCAGACCCA GCTGGCCGAA 
CAGGTACTGG GCCAACTGAC CCTGCCGATG CTGGGTGACA ACATCCTGCG CTTTTTTGCC 
GCTTACATGG GCAGTGTGGT GGGGGCGGTG TATGTGCGTG ATGAGCATGG CCGCCTGGTA 
CGGGTGGCTA CCTATGGCCT GGATGCTGAA GAGCAGGCTC GGGAGCAGGT AAAGGGCGAT 
CATGATGGCC TGTTGGCACA AGCGGTGCGC GAAGGTCGCC TGCTGTGCCT TGAAGACCTG 
CCCGAAGACT ACTATCGCCT GAGTTCCGGC CTCGGCAGCG GCCTGCCACG TAATGCCTTG 
CTGATGCCTG CGATCGACGA TGGTGGGATC AACGGCGTGG TCGAACTGGG CTTCCTGCGG 
CCTTTGCAGG CGCGCGACAA CGAGCTGATG GAGCGACTGG GCGGCAACCT GGGCATTTCC 
ATCGAAAGCG CCCGCTACCG TCAGCGTTTG CAGGAAGTGC TGGCCGAGAC CCAGCAGTTG 
AACGAAGAGC TGCAAGTGCA GCAGGAAGAA CTGAAAACCG CTAACGAAGA GCTGGAAGAG 
CAATCGCGCG TGCTCAAGGA GTCCCAGGCC CACCTGGAAA CCCAGCAGGC GGAACTGGAG 
CAGACCAACG AGCAGTTGTC CGAGCGTACC GAGGCGCTGG ACCGCAAGAA TGACGAACTG 
GTCCAGGCCC AGGAAGAACT GCAGGCACGT GCCGACGAGT TGCAGCGCTC TAGCAAGTAC 
AAGTCCGAAT TCCTCGCCAA CATGTCCCAC GAACTGCGCA CGCCGCTGAA CAGCTCGCTG 
ATCCTGGCCA AGCTGCTGGC GGAGAACGCC GAAGGCAACC TCAGCGACGA GCAGGTGAAG 
TTTGCCGAGT CGATCTACTC GGCTGGTAAC GACCTGCTCA ACTTGATCAA CGATATTCTC 
GATATCGCCA AGGTCGAGGC CGGCAAGCTC GAAGTGCGGC CAGAAAGCAC CCAGGTGGAG 
CGCCTGGTCG AGGGCCTGCG CGGGATGTTC GAACCGCTGG CCGGGCACAA GGGCCTGGCC 
TTCGAGGTAA CGGCCGAGGC ACAGGTGCCG GCCACCCTGT TCACCGACCG CCAGCGCCTT 
GAACAGATCC TCAAGAACCT GCTGTCCAAT GCCATCAAGT TCACTGAGCG TGGCAAGGTC 
AGCCTGAACA TTGGCTACCA GCCTGGCACG GGCATCGTGT TTGCCGTGCG CGATACTGGT 
ATCGGCATTG CGGCCGACCA GCAGCAGGCG ATTTTCGGTG CCTTCCATCA GGTCGATGGC 
ACCAGCAACC GCCGTTATGG CGGCACCGGC CTGGGCCTGT CGATTTCCCG AGACCTGGCG 
CATTTGCTCG GCGGGCAGAT CAACGTCGAC AGCAGCCCCG GCCAGGGCAG CGTGTTCAGT 
CTGATTCTGC CGGAGCACTA TGAGCGCCTG GCGCAGGACG TCGAGCCGCT CAGCCTGCGT 
CCGGCGGTCG ATACGTTGCC ACCCGCGCCG CAGGTGCCGG TGGTGTCAGC GCCAAAACGC 
CCGGCATTGG CATTTGTCGA CGACCGCGAG CGCGCACCGT TCAGCAACCG CTGCATCCTG 
GTGATCGAAG ACGAACCGAA CTTTGCCCGC ATCCTCTTCG ACCTGGCCCA CGAGCTGGGT 
TACAGCTGCC TGGTGGCGCA GGGCGCCGAC GAAGGCTTCG AGCTGGCCGC CCAGTACATC 
CCCGATGCGA TCCTGCTGGA CATGCGCCTG CCCGACCATT CCGGCCTGAC CGTGCTGCAA 
CGTCTGAAGG AGCAAGCCGG CACCCGGCAT ATTCCGGTGC ATATCATTTC TGTGGAAGAC 
CGGGTCGAGG CCGCCATGCA CATGGGCGCT GTCGGTTATG CGGTCAAGCC CACCAGCCGC 
GAAGAGCTCA AGGAAGTGTT CGCCCGCCTG GAAGCCAAGC TGACCCAGAA GCTCAAGCAC 
ATCCTGCTGG TGGAAGACGA CGACCTGCAG CGCGAGAGCA TTGCCCGGCT GATCGGCGAC 
GACGATGTCG AGATCACCGC CGTGGCGTTT GCCCAGGACG CGCTTGCGCT GCTGCGCGAG 
AACATCTACG ACTGCATGAT CATCGACCTG AAGCTGCCGG ACATGCTTGG CAACGAGCTG 
CTCAAGCGCA TGACCGCCGA GGATATCCGT TCCTTCCCGC CGGTGATCGT GTACACCGGG 
CGCAACCTGA CCCGCGAAGA AGAAGCCGAC CTGCTCAAGT ACTCGCGCTC GATCATCATC 
AAGGGCGCGC GCTCGCCGGA GCGCCTGCTT GACGAAGTGA CGCTGTTCCT GCACAAGGTC 
GAGTCGCAGC TGTCCAACGA GCGCCAGCGC ATGCTCAAGA CCGCCCGCAG CCGCGACAAG 
GTGTTCGAGG GGCGCAAGGT GCTGCTGGTA GACGATGATG TGCGTAACAT CTTCGCCCTC 
ACCAGCGCCC TGGAGCACAA GGGCGCAATC GTCGAGATCG GCCGTAACGG CCGTGAGGCC 
ATCGAACGCC TGGAGCAGCA TGACGACATC GACCTGGTGC TGATGGACGT GATGATGCCG 
GAAATGGACG GTTTCGAGGC CACCCGCCTG ATCCGCCAGC AACCGCGCTG GCGCAAGCTG 
CCGATCATCG CCGTGACCGC CAAGGCCATG AAGGATGACC AGCAGCGTTG CCTGCAGGCC 
GGGGCCAATG ATTACCTGGC CAAGCCGATC GACCTGGACC GTCTGTTCTC GTTGATCCGT 
GTATGGTTGC CGCAACTGGA GCGAATTTGA 

 

Protein sequence

MDQRSFRKLL SRNIGLPLGV GLLGAVAFVA VINYLLSAMQ WVEHTDRVIG NANETVKLSI 
DMETGMRGFL ITGDERFLDP YEVAKPRILG SLQSLRGMVE DNPQQVDRID RLIALQQAWN 
TFGSEMIALR RTQGDYQASI GNGRGKRLTD EIRKEFDGLI GTEQQLRMAR NEKVSSVTVT 
AISVFVLFIV GLSALLAYLG RRDLLALSGS YEENAKAQQR AAERLEHQAW LRNGQTQLAE 
QVLGQLTLPM LGDNILRFFA AYMGSVVGAV YVRDEHGRLV RVATYGLDAE EQAREQVKGD 
HDGLLAQAVR EGRLLCLEDL PEDYYRLSSG LGSGLPRNAL LMPAIDDGGI NGVVELGFLR 
PLQARDNELM ERLGGNLGIS IESARYRQRL QEVLAETQQL NEELQVQQEE LKTANEELEE 
QSRVLKESQA HLETQQAELE QTNEQLSERT EALDRKNDEL VQAQEELQAR ADELQRSSKY 
KSEFLANMSH ELRTPLNSSL ILAKLLAENA EGNLSDEQVK FAESIYSAGN DLLNLINDIL 
DIAKVEAGKL EVRPESTQVE RLVEGLRGMF EPLAGHKGLA FEVTAEAQVP ATLFTDRQRL 
EQILKNLLSN AIKFTERGKV SLNIGYQPGT GIVFAVRDTG IGIAADQQQA IFGAFHQVDG 
TSNRRYGGTG LGLSISRDLA HLLGGQINVD SSPGQGSVFS LILPEHYERL AQDVEPLSLR 
PAVDTLPPAP QVPVVSAPKR PALAFVDDRE RAPFSNRCIL VIEDEPNFAR ILFDLAHELG 
YSCLVAQGAD EGFELAAQYI PDAILLDMRL PDHSGLTVLQ RLKEQAGTRH IPVHIISVED 
RVEAAMHMGA VGYAVKPTSR EELKEVFARL EAKLTQKLKH ILLVEDDDLQ RESIARLIGD 
DDVEITAVAF AQDALALLRE NIYDCMIIDL KLPDMLGNEL LKRMTAEDIR SFPPVIVYTG 
RNLTREEEAD LLKYSRSIII KGARSPERLL DEVTLFLHKV ESQLSNERQR MLKTARSRDK 
VFEGRKVLLV DDDVRNIFAL TSALEHKGAI VEIGRNGREA IERLEQHDDI DLVLMDVMMP 
EMDGFEATRL IRQQPRWRKL PIIAVTAKAM KDDQQRCLQA GANDYLAKPI DLDRLFSLIR 
VWLPQLERI