| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2122 |
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| Symbol | pbpG |
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| ID | 5869911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2372479 |
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| End bp | 2373405 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641547247 |
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| Product | D-alanyl-D-alanine endopeptidase |
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| Protein accession | YP_001668359 |
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| Protein GI | 167033128 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.262762 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00124493 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAAACAT CCCTGTCCAT CCTCAGCCTG CTGCTGTTGC TCACAGGTAC CGCGACCCTT
CCGTCGACTG CTGCTGCACA ACCCCCGGTC CAGGCTCAAC GAGACCCGTC CAAGCTGCAC
CTGGCTTCAG GCAGTGCCCT GCTGATCGAC CTGAACAGCA ACCAGGAATT GTATTCGAGC
CACGCCGACC GCGTGGTGCC GATCGCCTCG GTAACCAAGC TGATGACAGC GATGGTGGTG
CTGGATGCCA AGCTGCCCAT GGATGAAATG CTCACCATGA CCATCGCCAA CAACCCGGAA
ATGAAAGGCG TGTATTCGCG CGTGCGCCTG GGCAGCCAGC TCGACCGCCG CGAAACCTTG
CTGATTACCC TGATGTCGTC GGAAAACCGT GCGGCCAACA GCCTGGCCAA CGCCTACCCC
GGCGGCTACC CGGCGTTCAT CAAGGCCATG AATGCCAAGG CCCGCAGCCT GGGTATGGCA
CACACCCGCT ATGTTGAGCC GACTGGCCTG TCGACGCAGA ACGTATCCAC CGCACGCGAC
CTGGCCAAGC TGCTGATGGC CTCGCGCAAG TACCCGATGC TGAGCGAGCT GTCGACCACC
CGCGAAAAGA CCGTGGCCTT CCGCAAGCCC AACTACACCC TGGGCTTCCG TAACACCGAC
CACCTGGTGA ACAAGAGCAA CTGGGACATC AAGCTGACCA AGACCGGCTT CACCAACGAG
GCCGGGCATT GCCTGGTGTT GCTGACCCGC ATGGACAATC GCCCGGTGGC CATGGTCATT
CTCGATGCCT TCGGCAAGTA CACCCACTTC GCCGATGCCA GCCGCATGCG TCAGTGGCTG
GAAACCGGTG CCGCCAAGCC GGCGCCAGCA GTGGCCATGC AGTACAAGGC GGACCGGCAG
AGCAAGGGCC GCTTGGTGAC CGAATAA
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| Protein sequence | MKTSLSILSL LLLLTGTATL PSTAAAQPPV QAQRDPSKLH LASGSALLID LNSNQELYSS
HADRVVPIAS VTKLMTAMVV LDAKLPMDEM LTMTIANNPE MKGVYSRVRL GSQLDRRETL
LITLMSSENR AANSLANAYP GGYPAFIKAM NAKARSLGMA HTRYVEPTGL STQNVSTARD
LAKLLMASRK YPMLSELSTT REKTVAFRKP NYTLGFRNTD HLVNKSNWDI KLTKTGFTNE
AGHCLVLLTR MDNRPVAMVI LDAFGKYTHF ADASRMRQWL ETGAAKPAPA VAMQYKADRQ
SKGRLVTE
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