Gene PputGB1_2110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2110 
Symbol 
ID5869899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2362563 
End bp2363114 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content66% 
IMG OID641547235 
Productisochorismatase hydrolase 
Protein accessionYP_001668347 
Protein GI167033116 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.379054 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATCG ATCCACTCAA GGCCACGCTG CTGGTCGTCG ACATCCAGGA AAAACTCATC 
GGCGCCATGA GCGACCCCGA AGGCACTCGG GCGCGGGCCC GCTGGTTGCT GGCCGCGACT
GCCGAGCTGG AACTGCCGAC GGTGATTTCC GAGCAGTACC CCAAGGGCCT GGGCCATACC
CTGGCGCAAT TGCTGGCCGC AGCACCGGCC GCCGAGGTGG TGGAGAAAAG CCACTTTTCC
TGCGTGGCCG CGCAGTGTCT GCCAGCCAGC CTGATGGCGC GTGAGCAGGT GATCGTCTGT
GGCATGGAAA CTCACGTCTG CGTGCTGCAG ACCGTGCTCG GCCTGCTGGG GCTGGGCAAG
CAGGTGTTCG TGGTCGAAGA TGCCTGCGAC AGCCGAACCT CGGCCAGCAA GGCGGCAGGC
CTGGCGCGCA TGCGTGCCGC CGGGGCGCAA GTGGTGACCC GTGAGATGGT GCTGTTCGAA
CTGCTGGGCA GCGCCAGCCA TCCGCTGTTC CGCCACATCA GCAAAACCTA CCTGGTCGGT
GAACAGCCCT GA
 
Protein sequence
MLIDPLKATL LVVDIQEKLI GAMSDPEGTR ARARWLLAAT AELELPTVIS EQYPKGLGHT 
LAQLLAAAPA AEVVEKSHFS CVAAQCLPAS LMAREQVIVC GMETHVCVLQ TVLGLLGLGK
QVFVVEDACD SRTSASKAAG LARMRAAGAQ VVTREMVLFE LLGSASHPLF RHISKTYLVG
EQP