Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2110 |
Symbol | |
ID | 5869899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2362563 |
End bp | 2363114 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641547235 |
Product | isochorismatase hydrolase |
Protein accession | YP_001668347 |
Protein GI | 167033116 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.379054 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGATCG ATCCACTCAA GGCCACGCTG CTGGTCGTCG ACATCCAGGA AAAACTCATC GGCGCCATGA GCGACCCCGA AGGCACTCGG GCGCGGGCCC GCTGGTTGCT GGCCGCGACT GCCGAGCTGG AACTGCCGAC GGTGATTTCC GAGCAGTACC CCAAGGGCCT GGGCCATACC CTGGCGCAAT TGCTGGCCGC AGCACCGGCC GCCGAGGTGG TGGAGAAAAG CCACTTTTCC TGCGTGGCCG CGCAGTGTCT GCCAGCCAGC CTGATGGCGC GTGAGCAGGT GATCGTCTGT GGCATGGAAA CTCACGTCTG CGTGCTGCAG ACCGTGCTCG GCCTGCTGGG GCTGGGCAAG CAGGTGTTCG TGGTCGAAGA TGCCTGCGAC AGCCGAACCT CGGCCAGCAA GGCGGCAGGC CTGGCGCGCA TGCGTGCCGC CGGGGCGCAA GTGGTGACCC GTGAGATGGT GCTGTTCGAA CTGCTGGGCA GCGCCAGCCA TCCGCTGTTC CGCCACATCA GCAAAACCTA CCTGGTCGGT GAACAGCCCT GA
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Protein sequence | MLIDPLKATL LVVDIQEKLI GAMSDPEGTR ARARWLLAAT AELELPTVIS EQYPKGLGHT LAQLLAAAPA AEVVEKSHFS CVAAQCLPAS LMAREQVIVC GMETHVCVLQ TVLGLLGLGK QVFVVEDACD SRTSASKAAG LARMRAAGAQ VVTREMVLFE LLGSASHPLF RHISKTYLVG EQP
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