Gene PputGB1_2105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2105 
Symbol 
ID5869894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2359048 
End bp2359959 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content67% 
IMG OID641547230 
Productbifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 
Protein accessionYP_001668342 
Protein GI167033111 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.538628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.603824 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCAC TTACCAGCCT CAAGCTGATC GACGGCAAGG CCACCGCCGC GCGTGTGCTG 
GCCGAGGTAC GCGAGCAGGT GCAGGAACTG CGCCAGGGCG GCGTGCAACC GGGCCTGGTC
GTGGTGCTGG TGGGTGCCGA TGCCGCCAGC CAGGTGTACG TGCGCAATAA AGTGCTGCGC
GCCGAAGAGG TGGGCATCCG CTCGCAGGAA CATCGCCTGC CCGCCGACAC CACCCAGGCC
CACCTGCTGA CCTTGATCGA CCGCCTGAAC CGCGACCCCG AGGTGAACGG CATCCTCGTG
CAACTGCCGT TGCCCGCGCA CATCGACGAG CATTGCGTAT TGCAGGCCAT CAACCCGCTC
AAGGACGTGG ACGGCTTCCA CAGCGAGAAC GTCGGTGGCC TGGCCCAGGG CCGCGATGTG
CTGACCCCGT GCACCCCCAG CGGCTGCATG CGCCTGCTGC GCGACGCCTG TGGCGAGCTG
CGTGGCAAAC ATGCGGTAGT GGTCGGCCGC TCGAACATCG TCGGCAAGCC CATGGCTGCC
CTGCTGTTGC AGGCCGACTG CACGGTGACT GTGGTGCATT CACGCAGCCG CGACCTGCCC
GCGTTGTGCC GCCAGGCCGA CATCCTGGTT GCCGCAGTGG GCAAGCCACG GCTGATCGGT
GCCGATTGCC TCAAACCCGG TGCGGTGGTG ATCGACGTCG GCATCAACCG CATCAATGAA
GACGGCCAAA ACCACCTGGT CGGTGATGTC GATTTCGCCG CTGCCCTGCC CCAGGTCGCC
GGCATTACCC CGGTCCCCGG CGGCGTCGGC CCGATGACCA TCGCCTACTT GATGAAAAAC
ACCCTGCTCG CCCTCGACCT GCAACAACAG GCCGCCCACC AGGAGCGCAC CGCATGCCTT
TCGCCCTGCT GA
 
Protein sequence
MNALTSLKLI DGKATAARVL AEVREQVQEL RQGGVQPGLV VVLVGADAAS QVYVRNKVLR 
AEEVGIRSQE HRLPADTTQA HLLTLIDRLN RDPEVNGILV QLPLPAHIDE HCVLQAINPL
KDVDGFHSEN VGGLAQGRDV LTPCTPSGCM RLLRDACGEL RGKHAVVVGR SNIVGKPMAA
LLLQADCTVT VVHSRSRDLP ALCRQADILV AAVGKPRLIG ADCLKPGAVV IDVGINRINE
DGQNHLVGDV DFAAALPQVA GITPVPGGVG PMTIAYLMKN TLLALDLQQQ AAHQERTACL
SPC