| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2104 |
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| Symbol | |
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| ID | 5869893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2357825 |
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| End bp | 2359066 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641547229 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001668341 |
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| Protein GI | 167033110 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR01373] sarcosine oxidase, beta subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.508 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTTCG CCCTGCTGAA ATACGGCCTG AGCGCCGACT ACCCGGTGGA GGTCGACCTG
CCGCCACCGT GCGAACTCAA GCCACGCTAT GACGTGGTGA TCATCGGCGG CGGCGGCCAC
GGCCTGGCCA TCGCCTACTA CCTGGCCAAG TACCACGGTG TGACCAACGT CGCCGTGCTG
GAAAAAGCCT ACCTGGGGGG CGGCAACACC GCGCGCAACA CCGCCGTGAT CCGCTCCAAC
TACCTCACCA GCGAAGGTGT GCGCTTCTAC GCAGAATCGG TGCGCATGTT CCAGAACCTG
TCGAACGAGT TCGACTTCAA CATCATGTAT TCCGAGCGCG GCCAGCTTAC CCTGGCGCAC
ACCGACGCCA CCGTGCGCGC CTTCCGCCAG CGCGCCGAAG TGAACAAGCA CTTCGGCGGG
CGTAGCGAAA TGATCGATCG CCAACAGATC CGCGAGCTGG TGCCCAGCCT GAACCTGGAC
CCCGGCCACC TGCCGGTGCT GGCGGGCCTG TGGCACATCG ACGGCGCCAC CGCGCGCCAC
GACGCGGTGG CCTGGGGCTA CGCCAAACAG GCAGCCAGGC GCGGCGTGCA AATCCACCAA
CTGACCGAAG TGCAGGACTT GCTGATCCGC AATGGCCGCA TCGAGGCGGT GAAGACCAAC
CGCGGCACGG TGCAATGCGG CTGCGTGGTC CAGGCCGTGG CGGGTGCCAG TTCGCTGTTG
ATGGCAAAGG CCGGCATCCG CGCGCCGATC CACACCTACC CGCTGCAAGC CATGGTCACC
CAGCCCTTCA AGCCGTTTCT CGACCCGCTG GTAAGTTCGT CGGCGCTGCA CTGCTACGTG
CAGCAGACCA GCCGAGGCGA AATCGTCTTT GGCGGCGGCT CCGACCCTTA CCCGCTGTAC
AACACCCGCT CCACCCTCGA CCTCAAGGAA AGCCTGCTGG CCCACGCCAT CGAAATGTTC
CCGTTCATGG CCAACGCCAA GCTGATGCGC CAGTGGGCCG GGATGACCGA TATGACCCCG
GACTACAGCC CGATCATGGG CCTGTCACCG GTGCAGAACT ACTACCTGGA TGCTGGCTGG
GGCACCTGGG GGTTCAAGGC CACGCCGATC TGCGGCAAGG CCATGGCCGA GCTGGTCGCC
AGCGGCGGCA AGGTGCCCGA GCTGATTGCC CCCTTCGCCC TCGAGCGCTT CAGCCGCTTC
CAGCAAGTCA ACGAAATGGG CGCCACTGCG GCCAGCCACT AG
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| Protein sequence | MPFALLKYGL SADYPVEVDL PPPCELKPRY DVVIIGGGGH GLAIAYYLAK YHGVTNVAVL
EKAYLGGGNT ARNTAVIRSN YLTSEGVRFY AESVRMFQNL SNEFDFNIMY SERGQLTLAH
TDATVRAFRQ RAEVNKHFGG RSEMIDRQQI RELVPSLNLD PGHLPVLAGL WHIDGATARH
DAVAWGYAKQ AARRGVQIHQ LTEVQDLLIR NGRIEAVKTN RGTVQCGCVV QAVAGASSLL
MAKAGIRAPI HTYPLQAMVT QPFKPFLDPL VSSSALHCYV QQTSRGEIVF GGGSDPYPLY
NTRSTLDLKE SLLAHAIEMF PFMANAKLMR QWAGMTDMTP DYSPIMGLSP VQNYYLDAGW
GTWGFKATPI CGKAMAELVA SGGKVPELIA PFALERFSRF QQVNEMGATA ASH
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