| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2102 |
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| Symbol | |
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| ID | 5869891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2354607 |
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| End bp | 2357510 |
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| Gene Length | 2904 bp |
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| Protein Length | 967 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641547227 |
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| Product | glycine cleavage T protein (aminomethyl transferase) |
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| Protein accession | YP_001668339 |
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| Protein GI | 167033108 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase)
[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGCC ACACTCGCCT CCCCGCGCCC ATGGGCCTGC TGATCGACCG CGAACGCCCC
TTGCGTTTCC AGTTCGACGG CCAGGCCTGT TCGGGCTTTG CCGGTGACAG CATTGCCAGC
GCCCTGCTTG GCAGCGGCCG CTGGTTGCTG TCGCGTTCAT TCAAATACCA CCGCCCACGC
GGCCCGCTGA GCATGGCCGG GCAAGATGCC AACACCCTGG TGCAACTGCC TGAGGAACCC
AACGTGCTGG CCGACCTGGA AGCCGCCCGC GACGGGCAGG TGGTCGAAGG GCAGAACTTC
AACGGCAGCC TGGAGCACGA CCGCGACGCC TACCTGGGCA AGTGCTCGCG CTTCATGCCG
GTGGGTTTCT ATTACCGCTC GTTCTACAAG CCCAAAGGCA TGTGGAAGGT GTGGGAGCCG
CTGATTCGCA AAAAGGCCGG CCTGGGCGTG CTCGACCAAG GCTTCAAGCC ACAGTACTAC
GACAAGGCCT ACCTGTTTGT CGATGTCGCC GTCATCGGCG CAGGCCCTGC CGGCCTGCGC
GCGGCGCTGG ACGCAGCCAA TGCCGGGGCC AAGGTGTTGC TGATCGAGCA ACAGCCCGTG
CTTGGCGGCT CGCTCACCTA CGCCCGCTTT GACATCGCCG GCACGCGTGC CGCCAGCCTG
CGTCAGGAAT TGCTGGCAGC CGTAGAGGGT CACCCGAATA TCCAGGTGCT GCTGGACGCC
ACCTGCAACG GCTGGTTCAC CGACCACTAC CTGCCAGTGA TCCAGCACAA GCGCCTGTAC
AAGGTGCGTG CCGGCCGTTG CCTGGTGGCG GCCGGTTCGT TCGACCAGCC GGTGGTGTTC
CGCAACAACG ACCTGCCCGG TGTGATGCTG ACCAGCGCCG CACAGCGGCT GATGAAGCTG
TACGCGGTCA AACCGGGCCA GCGCGCAGTG ATCCTGACCG GCCATGATGA CGGCTACCTT
GCCGCGCTCG ACCTGCAGGA ACAAGGCGTG GCTGTGGCTG CTGTGATCGA CATGCGCGCC
GCACCGGCCG ATGCCACGCT GGCCGCCGAG CTCAAGCGCC GCGATATCCC TGTGCACCTG
GGCAGCACCG TGTACGAAGC GCTGCACGAA GCGGGCATGC GCCATGTCAA TGGCGTGGAC
ATTCGCCCAA TCACCGGCCA GGGCAAGGTT GGCCCGCATG GCCTGCGCCT GGCCTGCGAC
CTGTTGTGCA TGTCGGCGGG CTACATGCCG GTGTACCAGT TGCTGTGCCA GGCCGGTGGC
AAGCTGGCCT ATGACATCGA CCGCGACGAG TTCGCCATCA GCCACCTGCC AGCCGGGCTG
GATATCGCCG GTTCGGTGAA CGGCCGCCAT GCGCTAGGCA ACGTGCTGGC CGACGCCACC
CGTGGGGCGG CCGAAGCCGT GGCCGCGCTG GGCCTGCAAG CGCCGGTGCA GCCGCTGTTC
AACGCCGAGG CCAAGGTCAA CTTCCCCTGG CCGATCTTCC CGCACCCCAA GGGCAAGGAT
TTCGTCGATT TCGACGAAGA CCTGCAGGTG CGCGACATCG TCAACGCCAC CCGCAGCGGC
TACCGCGATG TGCAACTGGT CAAACGCTTC TCCACGGTCG GCATGGGCCC ATCCCAGGGC
CGCCACTCGG CACTGCCCAC CGCGCGCCTG GTGGCCCATG CCACCGGCCG CAGCATCAGC
GAGACCGGCG TGACCACTGC CCGCCCACCG TTCCAGGCAG AAAAGCTGGC ACACATTGCC
GGCCGCGCCT TCGACCCGTA CCGGCAAACG CCAATGCACC GCCGCCACCT GCAAGCCGGG
GCGAACATGA TGCCCGCCGG CATCTGGCAG CGCCCGGCCT ACTATGGCAA GCCGGAGGAA
CGCGATCGCT GCATGCAGGA AGAAGCCCGG CATGTACGTG AAAAAGTCGG CCTGATCGAC
GTCTCCACGC TCGGCGGCCT GGACGTGCGT GGCCCGGATG CGGCCGAACT GCTGGAACGC
CTCTACACCT TCGGCTTCGC CAAACTGCCT GTTGGCCGCA CTCGCTATGC GTTGATGACC
AACGAGCACG GCGTGGTCAT CGACGATGGT GTCTGCGCAC GCTTGGGCGA GCAGCACTTC
TACGTAACCG CCACCACCAG CGGCGTCGAC CGCATCTACC AACAGATGCT GAAGTGGAAC
GCGCAGTGGC GCCTGGACGT GGACATCACC AACGTCACCG CTGCCCTGGC CGCCGTCAAC
CTGGCCGGGC CACTGTCACG CCAGGTGCTG GCCAAGGTGT GCGATGACGT AGACCTGGCC
GCCGGAGCCT TCCCTTACCT GGGCGTACGC CAGGGCAAGG TGGCAGGCAT TGCTGCACGT
ATCCTGCGAG TCGGCTTTGT CGGTGAGCTG GGCTATGAAG TGCACGTACC AGCGCGCCAT
GCCGAGCGGC TGTGGGATAC CTTGATGCAG GCGGGTGCCG GGTTGGGCAT TCGCCCCTTC
GGCGTCGAGA CCCAACGCCT GCTGCGCCTG GAAAAAGGCC ACGTGATCAT CGGCCAGGAC
ACCGACGGCA TGACGCACCC GGCGGAAATC GACATGCAGT GGGCCATCGG TCGCAAGAAG
CCGTTCTTCG TTGGCAAGCG CTCGATCGAA ATCCTCGAAG CACAGCCGCT CAAGCGCAAG
CTGGTCGGTT TCACGCTGCC CAAAGGCAGC CCGCGACCAC TGGAGGGGCA CCTGGTGCTG
GACGGCCGGG ACATCAGCGG TAACGTCACC TCCTGCGAGT ACTCGCAAAC CCTGGGGCAG
ATCATCGGCC TGGCCTATGC CGGCGCCCAC CAGGCCAGCC CCGGCATGCT CATCCCGATT
CGCACCGACG GTGGCGTGAT GGTCAATGCC AAGGTGGTAG CGCTGCCGTT CCACGACCCC
GACAACCTGC GCCAGGAGCT CTGA
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| Protein sequence | MNSHTRLPAP MGLLIDRERP LRFQFDGQAC SGFAGDSIAS ALLGSGRWLL SRSFKYHRPR
GPLSMAGQDA NTLVQLPEEP NVLADLEAAR DGQVVEGQNF NGSLEHDRDA YLGKCSRFMP
VGFYYRSFYK PKGMWKVWEP LIRKKAGLGV LDQGFKPQYY DKAYLFVDVA VIGAGPAGLR
AALDAANAGA KVLLIEQQPV LGGSLTYARF DIAGTRAASL RQELLAAVEG HPNIQVLLDA
TCNGWFTDHY LPVIQHKRLY KVRAGRCLVA AGSFDQPVVF RNNDLPGVML TSAAQRLMKL
YAVKPGQRAV ILTGHDDGYL AALDLQEQGV AVAAVIDMRA APADATLAAE LKRRDIPVHL
GSTVYEALHE AGMRHVNGVD IRPITGQGKV GPHGLRLACD LLCMSAGYMP VYQLLCQAGG
KLAYDIDRDE FAISHLPAGL DIAGSVNGRH ALGNVLADAT RGAAEAVAAL GLQAPVQPLF
NAEAKVNFPW PIFPHPKGKD FVDFDEDLQV RDIVNATRSG YRDVQLVKRF STVGMGPSQG
RHSALPTARL VAHATGRSIS ETGVTTARPP FQAEKLAHIA GRAFDPYRQT PMHRRHLQAG
ANMMPAGIWQ RPAYYGKPEE RDRCMQEEAR HVREKVGLID VSTLGGLDVR GPDAAELLER
LYTFGFAKLP VGRTRYALMT NEHGVVIDDG VCARLGEQHF YVTATTSGVD RIYQQMLKWN
AQWRLDVDIT NVTAALAAVN LAGPLSRQVL AKVCDDVDLA AGAFPYLGVR QGKVAGIAAR
ILRVGFVGEL GYEVHVPARH AERLWDTLMQ AGAGLGIRPF GVETQRLLRL EKGHVIIGQD
TDGMTHPAEI DMQWAIGRKK PFFVGKRSIE ILEAQPLKRK LVGFTLPKGS PRPLEGHLVL
DGRDISGNVT SCEYSQTLGQ IIGLAYAGAH QASPGMLIPI RTDGGVMVNA KVVALPFHDP
DNLRQEL
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