| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2088 |
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| Symbol | |
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| ID | 5869877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2341516 |
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| End bp | 2342664 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641547213 |
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| Product | ABC transporter related |
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| Protein accession | YP_001668325 |
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| Protein GI | 167033094 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.619396 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCAG TGATCAAAGA CAACGCGCAC GGCAAGACCC TGGTCAGCCT GCGCGGCCTG
AACAAGCACT ACGGCGACTT CACCGCCGTG GACAACCTCG ACCTGGAGAT CCAGGACGGC
GAGTTCCTGA CCTTCCTCGG CTCCAGCGGC TCGGGCAAGT CCACCACCCT GTCGATGCTG
GCCGGCTTCG AAACACCCAG CAGTGGCGAG ATCCTGGTCG ACGGCCAATC GCTGGTCAAC
GTACCACCAC ACAAGCGTGA CATCGGCATG GTGTTCCAGC GCTATTCGCT GTTCCCGCAC
CTGAACGTGC GCGACAACAT CGCCTTCCCG CTGGCCATTC GCAAGCTCGG CGCTGCCGAG
ACGGCCAAGC GCGTCGACGC CATGCTCAAG CTGGTGCAGC TAGAGAAGTT CGCCCACCGC
AAACCCTCGC AAATGTCTGG CGGCCAGCAG CAGCGTGTGG CGATTGCCCG GGCGCTGGTG
TACGAGCCGC GTATCCTGCT GATGGACGAG CCGCTCGGCG CGCTGGACAA GAAGCTGCGA
GAAGACCTGC AGGACGAACT GCGCCAGTTG CACCGCCGAC TGGGCATTAC CATCGTCTAC
GTCACCCACG ACCAGGAAGA AGCCATGCGC CTGTCCCAGC GCATCGCCAT TTTCAGCCAC
GGCAAGATCG TCGGCCTGGG CACCGGTTAC GACCTGTACC AAAACCCGCC GAATGCCTTT
GTCGCTTCGT TCCTGGGCAA CTCCAACTTC CTGCGGATCA AGGCCAGCAG CAATGGCGCA
GGCAGTTTCG AGGGGCAGCC GGTAGCCATT CGCCTGACCC CAGGGCTGGC CGCCTCGCAA
GATGCACTGA TCATGGTGCG CCCGGAGAAG GCCCTGGCCC TGACCGCCGA ACAGGCTGCG
CGCGCGCCAC TGCCAGCGGG CTGGAACGAG GTCAGCGCCA AGGTTGGCGA GGTGCTGTTC
CTGGGTGAGA GCCAAACCTG CCATGTGGTG ACTGCAGGGG GTACCGAGCT GACGGTGAAG
GCGCTGTCAG CCGCAGGCAT GCCGATGCAG CCGGGCGACA GCGTAAAGGT GCGTTGGGCA
GTGGCGGATG CGTGCATCTA TACCGAGTGG GCCGAGAGCG ATTTGAGCAA GTCTGCCGGG
GCGCATTGA
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| Protein sequence | MSAVIKDNAH GKTLVSLRGL NKHYGDFTAV DNLDLEIQDG EFLTFLGSSG SGKSTTLSML
AGFETPSSGE ILVDGQSLVN VPPHKRDIGM VFQRYSLFPH LNVRDNIAFP LAIRKLGAAE
TAKRVDAMLK LVQLEKFAHR KPSQMSGGQQ QRVAIARALV YEPRILLMDE PLGALDKKLR
EDLQDELRQL HRRLGITIVY VTHDQEEAMR LSQRIAIFSH GKIVGLGTGY DLYQNPPNAF
VASFLGNSNF LRIKASSNGA GSFEGQPVAI RLTPGLAASQ DALIMVRPEK ALALTAEQAA
RAPLPAGWNE VSAKVGEVLF LGESQTCHVV TAGGTELTVK ALSAAGMPMQ PGDSVKVRWA
VADACIYTEW AESDLSKSAG AH
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